Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   HHM66_RS10290 Genome accession   NZ_CP053074
Coordinates   2082786..2083499 (+) Length   237 a.a.
NCBI ID   WP_170078211.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2077786..2088499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HHM66_RS10280 (HHM66_10305) treC 2078856..2080484 (-) 1629 WP_015058125.1 alpha,alpha-phosphotrehalase -
  HHM66_RS10285 (HHM66_10310) treP 2080551..2082575 (-) 2025 WP_015058126.1 PTS system trehalose-specific EIIBC component -
  HHM66_RS10290 (HHM66_10315) treR 2082786..2083499 (+) 714 WP_170078211.1 trehalose operon repressor Regulator
  HHM66_RS10295 (HHM66_10320) - 2083778..2084115 (-) 338 Protein_1985 helix-turn-helix domain-containing protein -
  HHM66_RS10300 (HHM66_10325) - 2084302..2085158 (+) 857 Protein_1986 VOC family protein -
  HHM66_RS10305 (HHM66_10330) yaaA 2085200..2085931 (+) 732 WP_015058128.1 peroxide stress protein YaaA -
  HHM66_RS10310 (HHM66_10335) nrdG 2086105..2086719 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  HHM66_RS10315 (HHM66_10340) - 2086723..2087226 (-) 504 WP_015058129.1 GNAT family N-acetyltransferase -
  HHM66_RS10320 (HHM66_10345) - 2087235..2088170 (-) 936 WP_012767638.1 Gfo/Idh/MocA family oxidoreductase -
  HHM66_RS10325 (HHM66_10350) - 2088199..2088345 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27579.78 Da        Isoelectric Point: 9.6226

>NTDB_id=442803 HHM66_RS10290 WP_170078211.1 2082786..2083499(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSTLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=442803 HHM66_RS10290 WP_170078211.1 2082786..2083499(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAACTCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(92-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679