Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | HHM66_RS00820 | Genome accession | NZ_CP053074 |
| Coordinates | 131772..132725 (+) | Length | 317 a.a. |
| NCBI ID | WP_003060701.1 | Uniprot ID | A0A9X8T146 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 126772..137725
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHM66_RS00780 (HHM66_00780) | - | 127598..127963 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| HHM66_RS00785 (HHM66_00785) | comGA/cglA | 128044..128985 (+) | 942 | WP_170078124.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HHM66_RS00790 (HHM66_00790) | comYB | 128921..129952 (+) | 1032 | WP_015057201.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HHM66_RS00795 (HHM66_00795) | comYC | 129954..130280 (+) | 327 | WP_003055259.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HHM66_RS00800 (HHM66_00800) | comGD | 130255..130683 (+) | 429 | WP_041781473.1 | competence type IV pilus minor pilin ComGD | - |
| HHM66_RS00805 (HHM66_00805) | comGE | 130691..130936 (+) | 246 | WP_003058569.1 | competence type IV pilus minor pilin ComGE | - |
| HHM66_RS00810 (HHM66_00810) | comGF | 130917..131357 (+) | 441 | WP_170078125.1 | competence type IV pilus minor pilin ComGF | - |
| HHM66_RS00815 (HHM66_00815) | comGG | 131386..131709 (+) | 324 | WP_227985720.1 | competence type IV pilus minor pilin ComGG | - |
| HHM66_RS00820 (HHM66_00820) | comYH | 131772..132725 (+) | 954 | WP_003060701.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HHM66_RS00825 (HHM66_00825) | - | 132784..133980 (+) | 1197 | WP_015057203.1 | acetate kinase | - |
| HHM66_RS00830 (HHM66_00830) | - | 134286..134492 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| HHM66_RS00835 (HHM66_00835) | - | 134595..135275 (+) | 681 | WP_012766451.1 | type II CAAX endopeptidase family protein | - |
| HHM66_RS00840 (HHM66_00840) | - | 135293..135730 (+) | 438 | WP_012766452.1 | hypothetical protein | - |
| HHM66_RS00845 (HHM66_00845) | proC | 135869..136645 (-) | 777 | WP_014611934.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.01 Da Isoelectric Point: 4.7910
>NTDB_id=442754 HHM66_RS00820 WP_003060701.1 131772..132725(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=442754 HHM66_RS00820 WP_003060701.1 131772..132725(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAATATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGGAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCTGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAGCTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAATATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGGAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCTGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAGCTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |