Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   IRJ28_RS21205 Genome accession   NZ_CP064096
Coordinates   4044942..4045316 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain N1142-3at     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4039942..4050316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ28_RS21185 acdA 4040481..4041620 (+) 1140 WP_003242719.1 acyl-CoA dehydrogenase AcdA -
  IRJ28_RS21190 rpoE 4041803..4042324 (+) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  IRJ28_RS21195 pyrG 4042566..4044173 (+) 1608 WP_003227612.1 CTP synthase (glutamine hydrolyzing) -
  IRJ28_RS21200 ywjG 4044255..4044776 (-) 522 WP_003242809.1 DUF2529 domain-containing protein -
  IRJ28_RS21205 letA 4044942..4045316 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  IRJ28_RS21210 fbaA 4045497..4046354 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  IRJ28_RS21215 fsa 4046474..4047112 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  IRJ28_RS21220 murAB 4047491..4048780 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  IRJ28_RS21225 glpX 4048811..4049776 (+) 966 WP_003242962.1 class II fructose-bisphosphatase -
  IRJ28_RS21230 - 4049991..4050152 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=442282 IRJ28_RS21205 WP_003227621.1 4044942..4045316(+) (letA) [Bacillus subtilis strain N1142-3at]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=442282 IRJ28_RS21205 WP_003227621.1 4044942..4045316(+) (letA) [Bacillus subtilis strain N1142-3at]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363