Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DBV21_RS02405 Genome accession   NZ_CP053029
Coordinates   524159..524569 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas congelans strain TLP2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 519159..529569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBV21_RS02375 (DBV21_02560) - 519160..520164 (-) 1005 WP_214348807.1 aspartate carbamoyltransferase catalytic subunit -
  DBV21_RS02380 (DBV21_02565) pyrR 520177..520689 (-) 513 WP_003366144.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  DBV21_RS02385 (DBV21_02570) ruvX 520788..521228 (-) 441 WP_010440037.1 Holliday junction resolvase RuvX -
  DBV21_RS02390 (DBV21_02575) - 521228..521800 (-) 573 WP_214348811.1 YqgE/AlgH family protein -
  DBV21_RS02395 (DBV21_02580) - 521876..522778 (-) 903 WP_004414710.1 energy transducer TonB -
  DBV21_RS02400 (DBV21_02585) gshB 522945..523904 (-) 960 WP_003316740.1 glutathione synthase -
  DBV21_RS02405 (DBV21_02590) pilG 524159..524569 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  DBV21_RS02410 (DBV21_02595) pilH 524616..524981 (+) 366 WP_003316741.1 twitching motility response regulator PilH -
  DBV21_RS02415 (DBV21_02600) - 524996..525535 (+) 540 WP_003316742.1 chemotaxis protein CheW -
  DBV21_RS02420 (DBV21_02605) - 525586..527628 (+) 2043 WP_010440052.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=442256 DBV21_RS02405 WP_002551738.1 524159..524569(+) (pilG) [Pseudomonas congelans strain TLP2]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=442256 DBV21_RS02405 WP_002551738.1 524159..524569(+) (pilG) [Pseudomonas congelans strain TLP2]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGCTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGCTTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGTGCGATCAAGGCTCATGTGCCGGGCTTCGTAGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691