Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HKK59_RS10555 Genome accession   NZ_CP053027
Coordinates   2104318..2105091 (+) Length   257 a.a.
NCBI ID   WP_000456088.1    Uniprot ID   A0AAV3JLJ5
Organism   Streptococcus agalactiae strain 01173     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2099318..2110091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HKK59_RS10545 (HKK59_10570) rlmH 2102311..2102790 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HKK59_RS10550 (HKK59_10575) htrA 2102991..2104220 (+) 1230 WP_000728356.1 S1C family serine protease Regulator
  HKK59_RS10555 (HKK59_10580) spo0J 2104318..2105091 (+) 774 WP_000456088.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29237.78 Da        Isoelectric Point: 10.0836

>NTDB_id=442214 HKK59_RS10555 WP_000456088.1 2104318..2105091(+) (spo0J) [Streptococcus agalactiae strain 01173]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQKELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=442214 HKK59_RS10555 WP_000456088.1 2104318..2105091(+) (spo0J) [Streptococcus agalactiae strain 01173]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGGCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAAAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.255

99.222

0.568