Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IRJ27_RS09730 Genome accession   NZ_CP064095
Coordinates   1916878..1917705 (-) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain N1303-2Ay     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1911878..1922705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS09705 abrB 1914224..1914514 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  IRJ27_RS09710 rsmI 1914563..1915441 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IRJ27_RS09715 yazA 1915416..1915715 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  IRJ27_RS09720 trmNF 1915702..1916445 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  IRJ27_RS09725 yabA 1916504..1916863 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  IRJ27_RS09730 yaaT 1916878..1917705 (-) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  IRJ27_RS09735 holB 1917708..1918697 (-) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  IRJ27_RS09740 yaaR 1918709..1919149 (-) 441 WP_009966249.1 YaaR family protein -
  IRJ27_RS09745 darA 1919162..1919491 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  IRJ27_RS09750 tmk 1919565..1920203 (-) 639 WP_003243137.1 dTMP kinase -
  IRJ27_RS09755 yaaO 1920200..1921642 (-) 1443 WP_003243352.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=442058 IRJ27_RS09730 WP_003243571.1 1916878..1917705(-) (yaaT) [Bacillus subtilis strain N1303-2Ay]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=442058 IRJ27_RS09730 WP_003243571.1 1916878..1917705(-) (yaaT) [Bacillus subtilis strain N1303-2Ay]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1