Detailed information NTG0442003

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IRJ27_RS03090
• Genome accession: NZ_CP064095
• Coordinates: 642385..643521 (-)
• Length: 378 a.a.
• NCBI ID: WP_010886491.1
• Uniprot ID: Q00828
• Organism: Bacillus subtilis strain N1303-2Ay
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 637385..648521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ27_RS03050	xre	637717..638058 (+)	342	WP_003232719.1	HTH-type transcriptional regulator Xre	-
IRJ27_RS03055	xkdA	638221..638817 (+)	597	WP_003232721.1	ImmA/IrrE family metallo-endopeptidase	-
IRJ27_RS03060	xpdC	638861..639697 (-)	837	WP_003245071.1	manganese catalase family protein	-
IRJ27_RS03065	pghB	639774..640376 (-)	603	WP_003244789.1	poly-gamma-glutamate hydrolase family protein	-
IRJ27_RS03070	yjqA	640482..640859 (+)	378	WP_003245254.1	PH domain-containing protein	-
IRJ27_RS03075	xlyB	640899..641852 (-)	954	WP_003244876.1	N-acetylmuramoyl-L-alanine amidase	-
IRJ27_RS03080	yjpA	641973..642230 (+)	258	WP_003232731.1	YciI family protein	-
IRJ27_RS03085	phrA	642261..642395 (-)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
IRJ27_RS03090	rapC	642385..643521 (-)	1137	WP_010886491.1	response regulator aspartate phosphatase RapA	Regulator
IRJ27_RS03095	yjoB	643666..644937 (-)	1272	WP_003245490.1	ATPase YjoB	-
IRJ27_RS03100	yjoA	645086..645550 (+)	465	WP_003245144.1	DinB family protein	-
IRJ27_RS03105	yjnA	645775..646539 (+)	765	WP_003245643.1	sulfite exporter TauE/SafE family protein	-
IRJ27_RS03110	uxaA	646578..648071 (-)	1494	WP_003245409.1	UxaA family hydrolase	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44974.16 Da
• Isoelectric Point: 4.7611

>NTDB_id=442003 IRJ27_RS03090 WP_010886491.1 642385..643521(-) (rapC) [Bacillus subtilis strain N1303-2Ay]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFGKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=442003 IRJ27_RS03090 WP_010886491.1 642385..643521(-) (rapC) [Bacillus subtilis strain N1303-2Ay]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCACCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTGTTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCAGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCTGCCCTATATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGGGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCAGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-293)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

3D structure

• AlphaFold DB: Q00828

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.681	99.471	0.444
rapF	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.418