Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HKK52_RS22745 Genome accession   NZ_CP052862
Coordinates   4951692..4952096 (+) Length   134 a.a.
NCBI ID   WP_111448588.1    Uniprot ID   -
Organism   Pseudomonas sp. ADAK2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4946692..4957096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HKK52_RS22720 (HKK52_22720) pyrR 4947707..4948210 (-) 504 WP_169372673.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HKK52_RS22725 (HKK52_22725) ruvX 4948307..4948744 (-) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  HKK52_RS22730 (HKK52_22730) - 4948744..4949316 (-) 573 WP_169372674.1 YqgE/AlgH family protein -
  HKK52_RS22735 (HKK52_22735) - 4949536..4950435 (-) 900 WP_169372675.1 energy transducer TonB -
  HKK52_RS22740 (HKK52_22740) gshB 4950513..4951466 (-) 954 WP_169372676.1 glutathione synthase -
  HKK52_RS22745 (HKK52_22745) pilG 4951692..4952096 (+) 405 WP_111448588.1 twitching motility response regulator PilG Regulator
  HKK52_RS22750 (HKK52_22750) pilH 4952154..4952519 (+) 366 WP_027926574.1 twitching motility response regulator PilH -
  HKK52_RS22755 (HKK52_22755) - 4952530..4953069 (+) 540 WP_169372677.1 chemotaxis protein CheW -
  HKK52_RS22760 (HKK52_22760) - 4953287..4955344 (+) 2058 WP_169372678.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14575.96 Da        Isoelectric Point: 7.2441

>NTDB_id=441916 HKK52_RS22745 WP_111448588.1 4951692..4952096(+) (pilG) [Pseudomonas sp. ADAK2]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAVDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=441916 HKK52_RS22745 WP_111448588.1 4951692..4952096(+) (pilG) [Pseudomonas sp. ADAK2]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGCCGCACCGCCGAAACGCTGCT
GAAAAACGTGGGCTGTGAAGTCATCACCGCCGTCGATGGTTTCGATGCGCTGGCCAAGATTGCCGACAATCACCCGGGCA
TTATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.8

93.284

0.716