Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IRJ26_RS08145 Genome accession   NZ_CP064094
Coordinates   1536456..1537250 (+) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain N1108-5at     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1531456..1542250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ26_RS08125 walR 1531698..1532405 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  IRJ26_RS08130 walK 1532413..1534248 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  IRJ26_RS08135 walH 1534238..1535605 (+) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  IRJ26_RS08140 walI 1535592..1536434 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  IRJ26_RS08145 vicX 1536456..1537250 (+) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  IRJ26_RS08150 htrA 1537332..1538534 (+) 1203 WP_009969578.1 serine protease HtrC Regulator
  IRJ26_RS08155 - 1538554..1538682 (+) 129 WP_003242634.1 hypothetical protein -
  IRJ26_RS08160 - 1538799..1538987 (+) 189 Protein_1544 ATP-binding protein -
  IRJ26_RS08165 rocR 1538969..1540354 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  IRJ26_RS08170 rocD 1540595..1541800 (+) 1206 WP_003242970.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=441887 IRJ26_RS08145 WP_003242676.1 1536456..1537250(+) (vicX) [Bacillus subtilis strain N1108-5at]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=441887 IRJ26_RS08145 WP_003242676.1 1536456..1537250(+) (vicX) [Bacillus subtilis strain N1108-5at]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53