Detailed information NTG0441826

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IRJ26_RS00865
• Genome accession: NZ_CP064094
• Coordinates: 153550..154686 (-)
• Length: 378 a.a.
• NCBI ID: WP_010886491.1
• Uniprot ID: Q00828
• Organism: Bacillus subtilis strain N1108-5at
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 148550..159686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ26_RS00825	xre	148882..149223 (+)	342	WP_003232719.1	HTH-type transcriptional regulator Xre	-
IRJ26_RS00830	xkdA	149386..149982 (+)	597	WP_003232721.1	ImmA/IrrE family metallo-endopeptidase	-
IRJ26_RS00835	xpdC	150026..150862 (-)	837	WP_003245071.1	manganese catalase family protein	-
IRJ26_RS00840	pghB	150939..151541 (-)	603	WP_003244789.1	poly-gamma-glutamate hydrolase family protein	-
IRJ26_RS00845	yjqA	151647..152024 (+)	378	WP_003245254.1	PH domain-containing protein	-
IRJ26_RS00850	xlyB	152064..153017 (-)	954	WP_003244876.1	N-acetylmuramoyl-L-alanine amidase	-
IRJ26_RS00855	yjpA	153138..153395 (+)	258	WP_003232731.1	YciI family protein	-
IRJ26_RS00860	phrA	153426..153560 (-)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
IRJ26_RS00865	rapC	153550..154686 (-)	1137	WP_010886491.1	response regulator aspartate phosphatase RapA	Regulator
IRJ26_RS00870	yjoB	154831..156102 (-)	1272	WP_003245490.1	ATPase YjoB	-
IRJ26_RS00875	yjoA	156251..156715 (+)	465	WP_003245144.1	DinB family protein	-
IRJ26_RS00880	yjnA	156940..157704 (+)	765	WP_003245643.1	sulfite exporter TauE/SafE family protein	-
IRJ26_RS00885	uxaA	157743..159236 (-)	1494	WP_003245409.1	UxaA family hydrolase	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44974.16 Da
• Isoelectric Point: 4.7611

>NTDB_id=441826 IRJ26_RS00865 WP_010886491.1 153550..154686(-) (rapC) [Bacillus subtilis strain N1108-5at]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFGKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=441826 IRJ26_RS00865 WP_010886491.1 153550..154686(-) (rapC) [Bacillus subtilis strain N1108-5at]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCACCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTGTTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCAGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCTGCCCTATATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGGGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCAGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-293)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

3D structure

• AlphaFold DB: Q00828

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.681	99.471	0.444
rapF	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.418