Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IRJ24_RS05245 Genome accession   NZ_CP064093
Coordinates   1011744..1012571 (-) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain N1282-4at     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1006744..1017571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ24_RS05220 abrB 1009090..1009380 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  IRJ24_RS05225 rsmI 1009429..1010307 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IRJ24_RS05230 yazA 1010282..1010581 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  IRJ24_RS05235 trmNF 1010568..1011311 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  IRJ24_RS05240 yabA 1011370..1011729 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  IRJ24_RS05245 yaaT 1011744..1012571 (-) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  IRJ24_RS05250 holB 1012574..1013563 (-) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  IRJ24_RS05255 yaaR 1013575..1014015 (-) 441 WP_009966249.1 YaaR family protein -
  IRJ24_RS05260 darA 1014028..1014357 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  IRJ24_RS05265 tmk 1014431..1015069 (-) 639 WP_003243137.1 dTMP kinase -
  IRJ24_RS05270 yaaO 1015066..1016508 (-) 1443 WP_003243352.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=441698 IRJ24_RS05245 WP_003243571.1 1011744..1012571(-) (yaaT) [Bacillus subtilis strain N1282-4at]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=441698 IRJ24_RS05245 WP_003243571.1 1011744..1012571(-) (yaaT) [Bacillus subtilis strain N1282-4at]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1