Detailed information NTG0441647

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HHA21_RS19180
• Genome accession: NZ_CP052848
• Coordinates: 4026869..4028047 (-)
• Length: 392 a.a.
• NCBI ID: WP_032961144.1
• Uniprot ID: -
• Organism: Bordetella hinzii strain 1G1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4021869..4033047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHA21_RS19160 (HHA21_19160)	phnC	4022648..4023418 (+)	771	WP_029578354.1	phosphonate ABC transporter ATP-binding protein	-
HHA21_RS19165 (HHA21_19165)	phnE	4023406..4024269 (+)	864	WP_029578353.1	phosphonate ABC transporter, permease protein PhnE	-
HHA21_RS19170 (HHA21_19170)	phnE	4024266..4025087 (+)	822	WP_029578352.1	phosphonate ABC transporter, permease protein PhnE	-
HHA21_RS19175 (HHA21_19175)	-	4025275..4026858 (+)	1584	WP_032961477.1	CYTH and CHAD domain-containing protein	-
HHA21_RS19180 (HHA21_19180)	pilA	4026869..4028047 (-)	1179	WP_032961144.1	signal recognition particle-docking protein FtsY	Machinery gene
HHA21_RS19185 (HHA21_19185)	rsmD	4028120..4028740 (+)	621	WP_185843224.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HHA21_RS19190 (HHA21_19190)	coaD	4028764..4029276 (+)	513	WP_029578348.1	pantetheine-phosphate adenylyltransferase	-
HHA21_RS19195 (HHA21_19195)	-	4029347..4029601 (+)	255	WP_029578347.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HHA21_RS19200 (HHA21_19200)	-	4029598..4030809 (+)	1212	WP_032961141.1	benzoate/H(+) symporter BenE family transporter	-
HHA21_RS19205 (HHA21_19205)	-	4030806..4031189 (-)	384	WP_029578345.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 40735.93 Da
• Isoelectric Point: 5.8139

>NTDB_id=441647 HHA21_RS19180 WP_032961144.1 4026869..4028047(-) (pilA) [Bordetella hinzii strain 1G1]
MFSFFKKKTPPPAAPATPAPPPEPVVQPAEPVPPPADPSPVDAAPVEPIPAQAAPLEPAAVEPAPVAPPPVPPQAAPEPV
SEPAAAAPKKASWLSRLKQGLARTGQSLGGIFVGVKVDENLFEELESALIMADAGMEATDKLLTALRARVKKERIEDPAQ
VKAALRQLLAEHLKPLERGFDLRRSQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSR
NNVTVIAQEGGDPAAVAFDAVNAGRARGAGVVMIDTAGRLPTQLHLMEELKKIRRVIGKADAAAPHEVLLVVDGNTGQNA
LAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGEGLEDLQPFVAEEFATALLAD

Nucleotide

• Length: 1179 bp

>NTDB_id=441647 HHA21_RS19180 WP_032961144.1 4026869..4028047(-) (pilA) [Bordetella hinzii strain 1G1]
ATGTTCAGCTTCTTCAAGAAAAAGACCCCTCCGCCCGCCGCGCCGGCCACGCCCGCGCCGCCGCCGGAGCCCGTCGTCCA
GCCGGCCGAGCCCGTCCCGCCGCCGGCTGACCCGTCCCCCGTTGATGCGGCCCCCGTTGAGCCGATTCCTGCTCAAGCGG
CTCCCCTTGAACCGGCGGCCGTCGAACCGGCGCCTGTCGCCCCGCCGCCCGTGCCCCCGCAGGCCGCGCCCGAGCCGGTA
TCCGAGCCGGCCGCCGCCGCGCCCAAGAAGGCGTCCTGGCTCAGCCGGCTCAAGCAGGGGCTGGCGCGCACCGGCCAGAG
CCTCGGCGGCATTTTCGTCGGCGTCAAAGTCGACGAAAACCTGTTCGAGGAGCTGGAGTCGGCCCTCATCATGGCCGATG
CGGGCATGGAGGCCACCGATAAACTGCTCACGGCCCTGCGCGCCCGCGTCAAGAAAGAACGCATCGAGGATCCCGCCCAG
GTCAAGGCGGCGCTGCGCCAATTGCTGGCCGAGCACCTCAAGCCGCTGGAGCGCGGCTTCGACCTGCGGCGCAGCCAGCC
CCTGGTGGTGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAACTGGCCCACACCTTCCAGCGCC
AGGGCGCCAGCGTGCTGCTGGCCGCGGGCGACACCTTCCGCGCCGCGGCGCGCGAGCAACTGATCGAATGGGGCAGCCGC
AACAACGTCACCGTCATCGCCCAGGAGGGTGGCGACCCGGCGGCGGTGGCGTTTGACGCCGTCAACGCGGGCCGCGCGCG
CGGCGCCGGCGTGGTCATGATAGACACCGCGGGGCGCCTGCCGACACAGCTGCACCTGATGGAAGAGCTCAAGAAAATCC
GCCGCGTCATCGGCAAGGCCGATGCGGCCGCGCCCCATGAAGTGCTGTTGGTGGTCGACGGCAATACGGGCCAGAACGCG
CTGGCCCAGATCCGCGCCTTTGACGCCGCCATCCAGCTCACCGGCCTGGTGGTGACCAAGCTGGACGGCACCGCCAAGGG
CGGCACGCTGGCCGCGGTCGCGGCCGGCAGCCAGGGCGTGCGCCCCGTGCCGGTCTATTGGATCGGCGTGGGCGAGGGGC
TCGAAGACCTGCAGCCCTTCGTGGCCGAGGAGTTCGCCACCGCGCTGTTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (106-167)

• SRP54-type protein, GTPase domain (SRP54) (188-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.762	100	0.533