Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IRJ22_RS17145 Genome accession   NZ_CP064092
Coordinates   3311429..3312256 (+) Length   275 a.a.
NCBI ID   WP_003178162.1    Uniprot ID   Q65PI9
Organism   Bacillus licheniformis strain C5     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 3306429..3317256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ22_RS17120 - 3307491..3308933 (+) 1443 WP_025805857.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  IRJ22_RS17125 tmk 3308930..3309568 (+) 639 WP_003178154.1 dTMP kinase -
  IRJ22_RS17130 - 3309644..3309973 (+) 330 WP_003178156.1 cyclic-di-AMP receptor -
  IRJ22_RS17135 - 3309985..3310425 (+) 441 WP_003178158.1 YaaR family protein -
  IRJ22_RS17140 holB 3310437..3311426 (+) 990 WP_003178160.1 DNA polymerase III subunit delta' -
  IRJ22_RS17145 yaaT 3311429..3312256 (+) 828 WP_003178162.1 PSP1 domain-containing protein Regulator
  IRJ22_RS17150 yabA 3312271..3312633 (+) 363 WP_003178164.1 DNA replication initiation control protein YabA -
  IRJ22_RS17155 - 3312698..3313441 (+) 744 WP_003178166.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  IRJ22_RS17160 - 3313428..3313721 (+) 294 WP_003178169.1 GIY-YIG nuclease family protein -
  IRJ22_RS17165 rsmI 3313696..3314571 (+) 876 WP_025805862.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IRJ22_RS17170 abrB 3314620..3314910 (-) 291 WP_085959887.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 30998.69 Da        Isoelectric Point: 4.6295

>NTDB_id=441643 IRJ22_RS17145 WP_003178162.1 3311429..3312256(+) (yaaT) [Bacillus licheniformis strain C5]
MYNVIGVRFKKAGKIYYFDPNGFQIDKDSCVIVETVRGVEYGQVVIANKKVDENDVVLPLRKVIRVADERDRLIVEENQE
AALSAFDVCQKKVNEHGLEMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEVIATSSGPAKVVGLNI
LERILQVELTDCDKVVEYTWDELLQEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=441643 IRJ22_RS17145 WP_003178162.1 3311429..3312256(+) (yaaT) [Bacillus licheniformis strain C5]
TTGTACAACGTTATTGGTGTCCGCTTTAAAAAAGCGGGCAAAATATATTATTTCGATCCGAACGGATTTCAGATAGATAA
AGACAGCTGTGTGATCGTCGAAACGGTTCGCGGTGTTGAATACGGGCAGGTTGTCATTGCCAACAAGAAAGTAGACGAGA
ACGATGTCGTGCTGCCTTTAAGAAAAGTGATCAGAGTTGCGGATGAACGCGACCGCCTGATCGTTGAGGAGAATCAAGAA
GCTGCGCTGTCCGCCTTTGATGTCTGCCAGAAAAAGGTTAACGAGCACGGCCTTGAGATGAAACTGGTCGATGTGGAATT
CACTTTTGACCGCAACAAAGTCATTTTTTATTTTACGGCTGATGGAAGAGTCGATTTTAGAGAACTCGTCAAAGATTTGG
CATCGATCTTTAAAACGAGAATCGAGCTGAGACAAATCGGCGTCAGAGATGAAGCGAAGATGCTCGGCGGTATCGGACCG
TGTGGAAGAATGCTTTGCTGTTCCACGTTTTTAGGTGATTTTGAGCCCGTTTCTATTAAAATGGCAAAGGATCAAAATCT
GTCGCTGAATCCGACGAAGATTTCCGGACTATGCGGACGGCTGATGTGCTGTCTAAAGTATGAAAACGATGAATACGAAA
CAGCCAAAGAACAGCTTCCGGATATCGGGGAAGTGATCGCCACGTCCAGCGGCCCGGCAAAAGTCGTCGGGTTGAATATT
CTCGAACGCATTCTCCAGGTTGAACTGACAGACTGCGACAAAGTTGTTGAATATACGTGGGATGAGCTGTTGCAAGAAGG
TGTCGTATCTGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65PI9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

90.909

100

0.909