Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IRJ22_RS16665 Genome accession   NZ_CP064092
Coordinates   3224357..3225151 (-) Length   264 a.a.
NCBI ID   WP_003177960.1    Uniprot ID   A0ABY3FW26
Organism   Bacillus licheniformis strain C5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3219357..3230151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ22_RS16635 - 3219376..3219534 (-) 159 WP_003177948.1 CxxH/CxxC protein -
  IRJ22_RS16640 - 3219733..3220215 (-) 483 WP_009330015.1 DUF4234 domain-containing protein -
  IRJ22_RS16645 - 3220646..3221164 (-) 519 WP_011201784.1 GNAT family N-acetyltransferase -
  IRJ22_RS16650 - 3221195..3221665 (-) 471 WP_003177954.1 membrane protein -
  IRJ22_RS16655 - 3221921..3222766 (-) 846 WP_016886319.1 SAM hydrolase/SAM-dependent halogenase family protein -
  IRJ22_RS16660 htrA 3223063..3224274 (-) 1212 WP_003177958.1 S1C family serine protease Regulator
  IRJ22_RS16665 vicX 3224357..3225151 (-) 795 WP_003177960.1 MBL fold metallo-hydrolase Regulator
  IRJ22_RS16670 - 3225166..3226014 (-) 849 WP_011198494.1 two-component system regulatory protein YycI -
  IRJ22_RS16675 - 3226001..3227365 (-) 1365 WP_003177963.1 YycH family regulatory protein -
  IRJ22_RS16680 walK 3227355..3229199 (-) 1845 WP_009330019.1 cell wall metabolism sensor histidine kinase WalK -
  IRJ22_RS16685 walR 3229207..3229914 (-) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29219.18 Da        Isoelectric Point: 5.7678

>NTDB_id=441637 IRJ22_RS16665 WP_003177960.1 3224357..3225151(-) (vicX) [Bacillus licheniformis strain C5]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=441637 IRJ22_RS16665 WP_003177960.1 3224357..3225151(-) (vicX) [Bacillus licheniformis strain C5]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCGATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCGAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.053

99.242

0.527