Detailed information NTG0441632

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HHA22_RS19430
• Genome accession: NZ_CP052847
• Coordinates: 4080413..4081591 (-)
• Length: 392 a.a.
• NCBI ID: WP_032961144.1
• Uniprot ID: -
• Organism: Bordetella hinzii strain 1G2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4075413..4086591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHA22_RS19410 (HHA22_19405)	phnC	4076192..4076962 (+)	771	WP_029578354.1	phosphonate ABC transporter ATP-binding protein	-
HHA22_RS19415 (HHA22_19410)	phnE	4076950..4077813 (+)	864	WP_029578353.1	phosphonate ABC transporter, permease protein PhnE	-
HHA22_RS19420 (HHA22_19415)	phnE	4077810..4078631 (+)	822	WP_029578352.1	phosphonate ABC transporter, permease protein PhnE	-
HHA22_RS19425 (HHA22_19420)	-	4078819..4080402 (+)	1584	WP_032961477.1	CYTH and CHAD domain-containing protein	-
HHA22_RS19430 (HHA22_19425)	pilA	4080413..4081591 (-)	1179	WP_032961144.1	signal recognition particle-docking protein FtsY	Machinery gene
HHA22_RS19435 (HHA22_19430)	rsmD	4081664..4082284 (+)	621	WP_185843224.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HHA22_RS19440 (HHA22_19435)	coaD	4082308..4082820 (+)	513	WP_029578348.1	pantetheine-phosphate adenylyltransferase	-
HHA22_RS19445 (HHA22_19440)	-	4082891..4083145 (+)	255	WP_029578347.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HHA22_RS19450 (HHA22_19445)	-	4083142..4084353 (+)	1212	WP_032961141.1	benzoate/H(+) symporter BenE family transporter	-
HHA22_RS19455 (HHA22_19450)	-	4084350..4084733 (-)	384	WP_029578345.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 40735.93 Da
• Isoelectric Point: 5.8139

>NTDB_id=441632 HHA22_RS19430 WP_032961144.1 4080413..4081591(-) (pilA) [Bordetella hinzii strain 1G2]
MFSFFKKKTPPPAAPATPAPPPEPVVQPAEPVPPPADPSPVDAAPVEPIPAQAAPLEPAAVEPAPVAPPPVPPQAAPEPV
SEPAAAAPKKASWLSRLKQGLARTGQSLGGIFVGVKVDENLFEELESALIMADAGMEATDKLLTALRARVKKERIEDPAQ
VKAALRQLLAEHLKPLERGFDLRRSQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSR
NNVTVIAQEGGDPAAVAFDAVNAGRARGAGVVMIDTAGRLPTQLHLMEELKKIRRVIGKADAAAPHEVLLVVDGNTGQNA
LAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGEGLEDLQPFVAEEFATALLAD

Nucleotide

• Length: 1179 bp

>NTDB_id=441632 HHA22_RS19430 WP_032961144.1 4080413..4081591(-) (pilA) [Bordetella hinzii strain 1G2]
ATGTTCAGCTTCTTCAAGAAAAAGACCCCTCCGCCCGCCGCGCCGGCCACGCCCGCGCCGCCGCCGGAGCCCGTCGTCCA
GCCGGCCGAGCCCGTCCCGCCGCCGGCTGACCCGTCCCCCGTTGATGCGGCCCCCGTTGAGCCGATTCCTGCTCAAGCGG
CTCCCCTTGAACCGGCGGCCGTCGAACCGGCGCCTGTCGCCCCGCCGCCCGTGCCCCCGCAGGCCGCGCCCGAGCCGGTA
TCCGAGCCGGCCGCCGCCGCGCCCAAGAAGGCGTCCTGGCTCAGCCGGCTCAAGCAGGGGCTGGCGCGCACCGGCCAGAG
CCTCGGCGGCATTTTCGTCGGCGTCAAAGTCGACGAAAACCTGTTCGAGGAGCTGGAGTCGGCCCTCATCATGGCCGATG
CGGGCATGGAGGCCACCGATAAACTGCTCACGGCCCTGCGCGCCCGCGTCAAGAAAGAACGCATCGAGGATCCCGCCCAG
GTCAAGGCGGCGCTGCGCCAATTGCTGGCCGAGCACCTCAAGCCGCTGGAGCGCGGCTTCGACCTGCGGCGCAGCCAGCC
CCTGGTGGTGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAACTGGCCCACACCTTCCAGCGCC
AGGGCGCCAGCGTGCTGCTGGCCGCGGGCGACACCTTCCGCGCCGCGGCGCGCGAGCAACTGATCGAATGGGGCAGCCGC
AACAACGTCACCGTCATCGCCCAGGAGGGTGGCGACCCGGCGGCGGTGGCGTTTGACGCCGTCAACGCGGGCCGCGCGCG
CGGCGCCGGCGTGGTCATGATAGACACCGCGGGGCGCCTGCCGACACAGCTGCACCTGATGGAAGAGCTCAAGAAAATCC
GCCGCGTCATCGGCAAGGCCGATGCGGCCGCGCCCCATGAAGTGCTGTTGGTGGTCGACGGCAATACGGGCCAGAACGCG
CTGGCCCAGATCCGCGCCTTTGACGCCGCCATCCAGCTCACCGGCCTGGTGGTGACCAAGCTGGACGGCACCGCCAAGGG
CGGCACGCTGGCCGCGGTCGCGGCCGGCAGCCAGGGCGTGCGCCCCGTGCCGGTCTATTGGATCGGCGTGGGCGAGGGGC
TCGAAGACCTGCAGCCCTTCGTGGCCGAGGAGTTCGCCACCGCGCTGTTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (106-167)

• SRP54-type protein, GTPase domain (SRP54) (188-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.762	100	0.533