Detailed information NTG0441617

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HHA23_RS19425
• Genome accession: NZ_CP052846
• Coordinates: 4080570..4081748 (-)
• Length: 392 a.a.
• NCBI ID: WP_032961144.1
• Uniprot ID: -
• Organism: Bordetella hinzii strain 2B1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4075570..4086748

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHA23_RS19405 (HHA23_19400)	phnC	4076349..4077119 (+)	771	WP_029578354.1	phosphonate ABC transporter ATP-binding protein	-
HHA23_RS19410 (HHA23_19405)	phnE	4077107..4077970 (+)	864	WP_029578353.1	phosphonate ABC transporter, permease protein PhnE	-
HHA23_RS19415 (HHA23_19410)	phnE	4077967..4078788 (+)	822	WP_029578352.1	phosphonate ABC transporter, permease protein PhnE	-
HHA23_RS19420 (HHA23_19415)	-	4078976..4080559 (+)	1584	WP_032961477.1	CYTH and CHAD domain-containing protein	-
HHA23_RS19425 (HHA23_19420)	pilA	4080570..4081748 (-)	1179	WP_032961144.1	signal recognition particle-docking protein FtsY	Machinery gene
HHA23_RS19430 (HHA23_19425)	rsmD	4081821..4082441 (+)	621	WP_185843224.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HHA23_RS19435 (HHA23_19430)	coaD	4082465..4082977 (+)	513	WP_029578348.1	pantetheine-phosphate adenylyltransferase	-
HHA23_RS19440 (HHA23_19435)	-	4083048..4083302 (+)	255	WP_029578347.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HHA23_RS19445 (HHA23_19440)	-	4083299..4084510 (+)	1212	WP_032961141.1	benzoate/H(+) symporter BenE family transporter	-
HHA23_RS19450 (HHA23_19445)	-	4084507..4084890 (-)	384	WP_029578345.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 40735.93 Da
• Isoelectric Point: 5.8139

>NTDB_id=441617 HHA23_RS19425 WP_032961144.1 4080570..4081748(-) (pilA) [Bordetella hinzii strain 2B1]
MFSFFKKKTPPPAAPATPAPPPEPVVQPAEPVPPPADPSPVDAAPVEPIPAQAAPLEPAAVEPAPVAPPPVPPQAAPEPV
SEPAAAAPKKASWLSRLKQGLARTGQSLGGIFVGVKVDENLFEELESALIMADAGMEATDKLLTALRARVKKERIEDPAQ
VKAALRQLLAEHLKPLERGFDLRRSQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSR
NNVTVIAQEGGDPAAVAFDAVNAGRARGAGVVMIDTAGRLPTQLHLMEELKKIRRVIGKADAAAPHEVLLVVDGNTGQNA
LAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGEGLEDLQPFVAEEFATALLAD

Nucleotide

• Length: 1179 bp

>NTDB_id=441617 HHA23_RS19425 WP_032961144.1 4080570..4081748(-) (pilA) [Bordetella hinzii strain 2B1]
ATGTTCAGCTTCTTCAAGAAAAAGACCCCTCCGCCCGCCGCGCCGGCCACGCCCGCGCCGCCGCCGGAGCCCGTCGTCCA
GCCGGCCGAGCCCGTCCCGCCGCCGGCTGACCCGTCCCCCGTTGATGCGGCCCCCGTTGAGCCGATTCCTGCTCAAGCGG
CTCCCCTTGAACCGGCGGCCGTCGAACCGGCGCCTGTCGCCCCGCCGCCCGTGCCCCCGCAGGCCGCGCCCGAGCCGGTA
TCCGAGCCGGCCGCCGCCGCGCCCAAGAAGGCGTCCTGGCTCAGCCGGCTCAAGCAGGGGCTGGCGCGCACCGGCCAGAG
CCTCGGCGGCATTTTCGTCGGCGTCAAAGTCGACGAAAACCTGTTCGAGGAGCTGGAGTCGGCCCTCATCATGGCCGATG
CGGGCATGGAGGCCACCGATAAACTGCTCACGGCCCTGCGCGCCCGCGTCAAGAAAGAACGCATCGAGGATCCCGCCCAG
GTCAAGGCGGCGCTGCGCCAATTGCTGGCCGAGCACCTCAAGCCGCTGGAGCGCGGCTTCGACCTGCGGCGCAGCCAGCC
CCTGGTGGTGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAACTGGCCCACACCTTCCAGCGCC
AGGGCGCCAGCGTGCTGCTGGCCGCGGGCGACACCTTCCGCGCCGCGGCGCGCGAGCAACTGATCGAATGGGGCAGCCGC
AACAACGTCACCGTCATCGCCCAGGAGGGTGGCGACCCGGCGGCGGTGGCGTTTGACGCCGTCAACGCGGGCCGCGCGCG
CGGCGCCGGCGTGGTCATGATAGACACCGCGGGGCGCCTGCCGACACAGCTGCACCTGATGGAAGAGCTCAAGAAAATCC
GCCGCGTCATCGGCAAGGCCGATGCGGCCGCGCCCCATGAAGTGCTGTTGGTGGTCGACGGCAATACGGGCCAGAACGCG
CTGGCCCAGATCCGCGCCTTTGACGCCGCCATCCAGCTCACCGGCCTGGTGGTGACCAAGCTGGACGGCACCGCCAAGGG
CGGCACGCTGGCCGCGGTCGCGGCCGGCAGCCAGGGCGTGCGCCCCGTGCCGGTCTATTGGATCGGCGTGGGCGAGGGGC
TCGAAGACCTGCAGCCCTTCGTGGCCGAGGAGTTCGCCACCGCGCTGTTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (106-167)

• SRP54-type protein, GTPase domain (SRP54) (188-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.762	100	0.533