Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   IPZ77_RS16200 Genome accession   NZ_CP064057
Coordinates   3567112..3568266 (-) Length   384 a.a.
NCBI ID   WP_030734901.1    Uniprot ID   A0A0F7FUX4
Organism   Streptomyces sp. XC 2026     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3562112..3573266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IPZ77_RS16180 (IPZ77_16185) - 3562930..3563592 (+) 663 WP_200366362.1 response regulator transcription factor -
  IPZ77_RS16185 (IPZ77_16190) - 3563604..3564866 (+) 1263 WP_200366363.1 HAMP domain-containing sensor histidine kinase -
  IPZ77_RS16190 (IPZ77_16195) - 3564912..3565823 (-) 912 WP_200366364.1 A/G-specific adenine glycosylase -
  IPZ77_RS16195 (IPZ77_16200) - 3565975..3566823 (+) 849 WP_200366365.1 hypothetical protein -
  IPZ77_RS16200 (IPZ77_16205) disA 3567112..3568266 (-) 1155 WP_030734901.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  IPZ77_RS16205 (IPZ77_16210) radA/sms 3568307..3569752 (-) 1446 WP_200366367.1 DNA repair protein RadA Machinery gene
  IPZ77_RS27625 (IPZ77_16215) - 3569870..3571582 (+) 1713 WP_200366368.1 sigma-70 family RNA polymerase sigma factor -
  IPZ77_RS16215 (IPZ77_16220) - 3571633..3572343 (-) 711 WP_200366369.1 TetR family transcriptional regulator -
  IPZ77_RS16220 (IPZ77_16225) - 3572333..3573163 (-) 831 WP_200366370.1 sugar phosphate isomerase/epimerase -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 40872.72 Da        Isoelectric Point: 5.3601

>NTDB_id=441493 IPZ77_RS16200 WP_030734901.1 3567112..3568266(-) (disA) [Streptomyces sp. XC 2026]
MAANDRPAGPGRAGGAGGGSGADGLLRASLSAVAPGTQLRDGLERILRGNTGGLIVLGVDRTVESLCTGGFVLDVEFTAT
RLRELCKLDGAVIVDRDITKIVRAGVQLVPDASIPTEETGTRHRTAQRVSIQTGFPVVSVSQSMRLIALYLDGQRRVLED
SGAILSRANQALATLERYKLRFDEVAGTLSALEIEDLVTVRDVAAVAQRLEMVRRIAAEIAEYVVELGTDGRLLSLQLDE
LIAGVEPERQLIVRDYLPESPQGTEPPGGKRSRRVGTALSELDALTHAELLELPIVARALGHGASPEALDGAVSPRGFRL
LAKVPRLPGLVIDRLVDHFGGLQKLLAASVDDLQAVDGVGETRARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=441493 IPZ77_RS16200 WP_030734901.1 3567112..3568266(-) (disA) [Streptomyces sp. XC 2026]
ATGGCAGCCAACGACCGGCCGGCGGGTCCCGGCAGGGCCGGGGGTGCCGGGGGAGGTTCCGGAGCGGACGGACTGCTGCG
CGCCTCGCTGAGCGCGGTGGCCCCCGGAACCCAGCTGCGGGACGGCCTGGAGCGCATCCTGCGGGGCAACACGGGCGGCC
TGATCGTCCTCGGCGTGGACCGTACCGTCGAATCCCTGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACC
CGGCTGCGCGAGCTGTGCAAGCTGGACGGCGCGGTGATCGTGGACCGCGACATCACCAAGATCGTCCGCGCGGGCGTGCA
GTTGGTCCCGGACGCGAGCATCCCGACCGAGGAGACCGGCACCCGGCACCGTACGGCGCAGCGGGTCTCCATCCAGACCG
GGTTCCCCGTGGTGTCGGTCAGCCAGTCGATGCGGCTGATCGCCCTGTACCTGGACGGGCAGCGGCGGGTCCTGGAGGAC
TCGGGCGCCATCCTGTCCCGGGCGAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTGCGGTTCGACGAGGTCGCGGG
CACCCTGTCGGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGGCGGCGGTGGCGCAGCGGCTGGAGATGGTGC
GCCGGATCGCGGCCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGGCGGCTGCTGTCGCTCCAGCTGGACGAG
CTGATCGCGGGTGTGGAGCCGGAACGGCAGCTGATCGTGCGCGACTACCTGCCGGAATCGCCGCAGGGCACGGAGCCCCC
GGGCGGCAAGCGTTCGCGCCGGGTGGGCACGGCGCTGTCCGAGCTCGACGCGCTGACCCACGCCGAGCTGCTGGAACTGC
CCATCGTGGCGCGGGCGCTGGGCCACGGCGCCTCGCCCGAGGCGCTGGACGGCGCGGTCTCCCCGCGGGGTTTCCGGCTG
CTGGCGAAGGTCCCGCGGCTGCCGGGTCTGGTCATCGACCGGCTCGTGGACCACTTCGGCGGGTTGCAGAAGCTGCTGGC
GGCGAGTGTGGACGACCTGCAGGCGGTGGACGGCGTCGGAGAGACCCGGGCGCGCTCGGTGCGCGAGGGCCTGTCCCGGC
TGGCCGAGTCCTCGATCCTGGAACGGTACGTGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0F7FUX4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.258

92.969

0.411