Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HHK01_RS05600 Genome accession   NZ_CP052135
Coordinates   1137776..1138261 (-) Length   161 a.a.
NCBI ID   WP_170006802.1    Uniprot ID   -
Organism   Bacillus fonticola strain CS13     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1132776..1143261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HHK01_RS05580 corA 1133513..1134526 (+) 1014 WP_170006797.1 magnesium/cobalt transporter CorA -
  HHK01_RS05585 - 1134721..1136022 (+) 1302 WP_228027669.1 MFS transporter -
  HHK01_RS05590 - 1136177..1136620 (+) 444 WP_170006799.1 TlpA disulfide reductase family protein -
  HHK01_RS05595 - 1136759..1137658 (+) 900 WP_170006800.1 chemotaxis protein -
  HHK01_RS05600 kre 1137776..1138261 (-) 486 WP_170006802.1 YkyB family protein Regulator
  HHK01_RS05605 - 1138390..1138593 (-) 204 WP_407646936.1 hypothetical protein -
  HHK01_RS05610 - 1138770..1139147 (+) 378 WP_170006803.1 CrcB family protein -
  HHK01_RS05615 - 1139144..1139503 (+) 360 WP_170006804.1 CrcB family protein -
  HHK01_RS05620 - 1139883..1140863 (-) 981 WP_228027670.1 ABC transporter substrate-binding protein -
  HHK01_RS05625 - 1141031..1142032 (+) 1002 WP_194241284.1 iron ABC transporter permease -
  HHK01_RS05630 - 1142029..1143075 (+) 1047 WP_170006806.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 18444.23 Da        Isoelectric Point: 10.6103

>NTDB_id=441437 HHK01_RS05600 WP_170006802.1 1137776..1138261(-) (kre) [Bacillus fonticola strain CS13]
MGHESSHRPHPTKPLTVDNLTQAIFTVNRHAKTAINPKYLYLLKQRTIEKLLKEGKAEKVGLHFSRNPRFAKQQSDCLIR
CGNYTFHVPPTKEDFQTLPHLGQLETSVRNPKSALNLSEAKVLLEKYTGMKEKTPTNGPRQGRRAPAYQRPVFKPLGERY
E

Nucleotide


Download         Length: 486 bp        

>NTDB_id=441437 HHK01_RS05600 WP_170006802.1 1137776..1138261(-) (kre) [Bacillus fonticola strain CS13]
ATGGGACACGAATCATCCCATCGCCCACACCCAACTAAACCCCTTACTGTGGACAACCTCACGCAGGCGATCTTCACCGT
GAACCGCCACGCGAAAACCGCTATTAACCCGAAGTATTTATACTTGCTTAAACAAAGAACCATCGAAAAGCTGCTAAAGG
AAGGAAAAGCGGAGAAAGTAGGTTTACATTTTTCTCGTAATCCACGGTTCGCTAAACAGCAATCCGACTGCCTCATCCGT
TGTGGGAACTACACTTTTCACGTACCCCCAACGAAAGAAGATTTTCAGACGTTACCACACTTAGGTCAACTAGAAACATC
TGTCCGCAATCCGAAATCGGCTCTAAATTTATCAGAAGCGAAGGTCCTCTTAGAGAAATACACAGGAATGAAAGAAAAAA
CTCCTACTAACGGTCCTAGACAAGGAAGACGCGCCCCTGCTTACCAAAGACCCGTTTTTAAACCTCTAGGTGAACGCTAC
GAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(17-131)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

62.759

90.062

0.565