Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   HHK01_RS05195 Genome accession   NZ_CP052135
Coordinates   1059099..1059740 (+) Length   213 a.a.
NCBI ID   WP_170006729.1    Uniprot ID   -
Organism   Bacillus fonticola strain CS13     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1054099..1064740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HHK01_RS05175 - 1055194..1056393 (+) 1200 WP_170006725.1 putative glycoside hydrolase -
  HHK01_RS05180 - 1056721..1057305 (+) 585 WP_170006726.1 N-acetyltransferase -
  HHK01_RS05185 - 1057356..1057967 (+) 612 WP_170006727.1 hypothetical protein -
  HHK01_RS05190 spxA 1058279..1058677 (+) 399 WP_170006728.1 transcriptional regulator SpxA -
  HHK01_RS05195 mecA 1059099..1059740 (+) 642 WP_170006729.1 adaptor protein MecA Regulator
  HHK01_RS05200 cls 1059802..1061328 (+) 1527 WP_170006730.1 cardiolipin synthase -
  HHK01_RS05205 - 1061500..1062597 (+) 1098 WP_170006731.1 competence protein CoiA -
  HHK01_RS05210 pepF 1062720..1064528 (+) 1809 WP_170006732.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 25229.95 Da        Isoelectric Point: 3.8461

>NTDB_id=441436 HHK01_RS05195 WP_170006729.1 1059099..1059740(+) (mecA) [Bacillus fonticola strain CS13]
MEIERINENTVKFYISYLDIEERGFDKEEIWYNRERSEELFWEMMDEVHQEEEFMVEGPLWIQVQALEKGLEVLVTKAQV
TKDGQKFELPMPDDKKQSGMNENIEDLLEAAMEEEDNDTLEFLVVFDDFEDAVSLAKRDLPDFFSHSLYAYEGKYYLYTL
FEEEQATEEEIENVLSILLEYSEESPLTVHRLEEYGTSVAQDNALAVLRQHFT

Nucleotide


Download         Length: 642 bp        

>NTDB_id=441436 HHK01_RS05195 WP_170006729.1 1059099..1059740(+) (mecA) [Bacillus fonticola strain CS13]
ATGGAAATCGAACGCATCAATGAGAATACGGTGAAGTTTTACATCTCTTACTTGGATATAGAGGAGCGCGGTTTTGACAA
AGAAGAAATTTGGTACAATCGCGAACGGAGTGAAGAACTCTTTTGGGAAATGATGGATGAAGTTCATCAAGAAGAAGAAT
TTATGGTTGAAGGGCCTCTCTGGATTCAGGTGCAGGCGCTTGAAAAAGGACTAGAAGTACTCGTGACGAAAGCACAAGTT
ACTAAAGACGGACAAAAGTTCGAGTTGCCGATGCCAGATGATAAAAAGCAAAGTGGTATGAACGAGAATATCGAGGATTT
GTTGGAAGCTGCTATGGAAGAGGAAGACAATGATACGTTAGAATTTCTCGTCGTGTTCGATGACTTTGAAGATGCTGTTT
CGTTAGCAAAGCGTGATCTTCCTGATTTTTTCTCCCACAGCCTGTACGCGTATGAAGGGAAATACTACTTGTATACTCTA
TTCGAGGAAGAACAAGCAACAGAGGAAGAAATTGAAAACGTACTCAGCATTTTGCTTGAATACAGTGAAGAATCGCCTTT
AACGGTTCATCGTCTAGAAGAATACGGAACAAGTGTGGCACAAGATAATGCCCTTGCTGTTTTACGTCAACACTTTACTT
AA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

59.091

100

0.61