Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   HHK01_RS05085 Genome accession   NZ_CP052135
Coordinates   1034640..1035593 (+) Length   317 a.a.
NCBI ID   WP_170006708.1    Uniprot ID   -
Organism   Bacillus fonticola strain CS13     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1029640..1040593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HHK01_RS05050 - 1029932..1030681 (+) 750 WP_170006702.1 esterase -
  HHK01_RS05055 - 1030773..1031069 (+) 297 WP_170008665.1 metal-sulfur cluster assembly factor -
  HHK01_RS05060 - 1031111..1031935 (-) 825 WP_170006703.1 undecaprenyl-diphosphate phosphatase -
  HHK01_RS05065 - 1032118..1032300 (+) 183 WP_170006704.1 YjzC family protein -
  HHK01_RS05070 - 1032349..1032528 (-) 180 WP_170006705.1 YjzD family protein -
  HHK01_RS05075 - 1032661..1033386 (+) 726 WP_170006706.1 hypothetical protein -
  HHK01_RS05080 - 1033447..1034190 (+) 744 WP_170006707.1 hypothetical protein -
  HHK01_RS05085 med 1034640..1035593 (+) 954 WP_170006708.1 BMP family ABC transporter substrate-binding protein Regulator
  HHK01_RS05090 - 1035846..1036145 (-) 300 WP_170006709.1 hypothetical protein -
  HHK01_RS05095 - 1036456..1037391 (+) 936 WP_170008666.1 beta-ketoacyl-ACP synthase III -
  HHK01_RS05100 fabF 1037429..1038667 (+) 1239 WP_170006710.1 beta-ketoacyl-ACP synthase II -
  HHK01_RS05105 - 1038765..1039499 (+) 735 WP_170006711.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34866.87 Da        Isoelectric Point: 3.8281

>NTDB_id=441433 HHK01_RS05085 WP_170006708.1 1034640..1035593(+) (med) [Bacillus fonticola strain CS13]
MSLLKIGFLSLFVFVLAGCQGGLPADQESPKVGLLVPETINDQVWGTKGYRGLLSIQSKYDLDVYYKEDVESEAAIKQAV
VEYASKGVTLLFGHGNQYTEVFNEIASTYPDIQFISFNGQATEVNTTSLQFEGRAMGFFGGMVAAAESETRRIGVLAAFD
WQPEVTGFVEGAAYEAEDVEVFVEYVENWDDEEKALQQLDTLLAKQVDVVYPAGDGFNVPVIEEVKERGLYVIGYVSDQS
DLGEATVLTSTIQQVDQLYELVADKYLEGELEGGNPTFDFQDGVISLGAFSPNVGEEVRSRVEEEIQKFIDSGELPK

Nucleotide


Download         Length: 954 bp        

>NTDB_id=441433 HHK01_RS05085 WP_170006708.1 1034640..1035593(+) (med) [Bacillus fonticola strain CS13]
TTGAGTTTGCTGAAAATTGGATTCCTCAGTCTTTTCGTGTTTGTTCTGGCAGGGTGTCAAGGCGGGCTACCAGCGGATCA
AGAATCGCCGAAAGTAGGTCTGCTCGTGCCGGAAACCATTAATGACCAAGTTTGGGGGACAAAGGGGTACCGGGGACTAT
TGTCTATTCAATCCAAATATGATCTTGATGTGTACTACAAAGAAGACGTTGAATCTGAAGCCGCGATTAAACAAGCTGTT
GTTGAATACGCTTCAAAGGGTGTGACGCTTCTCTTTGGACATGGAAACCAATATACAGAAGTTTTTAATGAAATTGCCAG
TACATACCCTGATATACAATTTATCAGTTTTAACGGACAAGCTACGGAAGTCAATACGACATCACTTCAATTTGAAGGAC
GGGCGATGGGTTTCTTTGGAGGGATGGTGGCCGCTGCGGAAAGCGAGACACGTCGAATCGGTGTATTGGCCGCGTTTGAT
TGGCAACCAGAGGTGACTGGTTTTGTGGAGGGTGCTGCTTATGAAGCAGAGGATGTCGAAGTGTTTGTCGAGTACGTGGA
GAATTGGGATGATGAAGAAAAGGCGCTTCAACAGCTGGACACTTTATTAGCCAAACAGGTGGACGTTGTGTACCCGGCAG
GCGATGGGTTTAATGTACCCGTTATTGAAGAAGTGAAGGAACGTGGCTTATATGTTATTGGCTATGTATCCGATCAATCT
GATTTAGGGGAAGCGACCGTTTTAACGAGCACGATACAGCAGGTTGATCAACTATACGAACTTGTAGCAGATAAGTATTT
AGAAGGCGAGTTAGAGGGAGGGAACCCAACTTTTGATTTTCAAGATGGTGTGATTTCTCTTGGGGCGTTTAGTCCAAATG
TAGGAGAAGAAGTGAGATCTCGTGTAGAGGAAGAAATTCAGAAATTTATTGATTCAGGCGAACTTCCAAAATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

51.803

96.215

0.498