Detailed information NTG0441277

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HIN86_RS11075
• Genome accession: NZ_CP051875
• Coordinates: 2286229..2286930 (-)
• Length: 233 a.a.
• NCBI ID: WP_032000520.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Ab-B004d-c
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2281229..2291930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIN86_RS11045 (HIN86_11045)	-	2281536..2281979 (-)	444	WP_001246675.1	SRPBCC family protein	-
HIN86_RS11050 (HIN86_11050)	tadA	2282049..2282552 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
HIN86_RS11055 (HIN86_11055)	-	2282559..2283683 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
HIN86_RS11060 (HIN86_11060)	ung	2283680..2284393 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
HIN86_RS11065 (HIN86_11065)	-	2284444..2285040 (-)	597	WP_032000522.1	6-pyruvoyl trahydropterin synthase family protein	-
HIN86_RS11070 (HIN86_11070)	gspK	2285270..2286229 (-)	960	WP_032000521.1	type II secretion system minor pseudopilin GspK	-
HIN86_RS11075 (HIN86_11075)	xcpW	2286229..2286930 (-)	702	WP_032000520.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HIN86_RS11080 (HIN86_11080)	xcpV	2286930..2287310 (-)	381	WP_000836907.1	type II secretion system minor pseudopilin GspI	Machinery gene
HIN86_RS11085 (HIN86_11085)	-	2287300..2287854 (-)	555	WP_000841373.1	type II secretion system protein	-
HIN86_RS11090 (HIN86_11090)	-	2287864..2288472 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HIN86_RS11095 (HIN86_11095)	-	2288510..2289283 (-)	774	WP_000497298.1	TatD family hydrolase	-
HIN86_RS11100 (HIN86_11100)	-	2289301..2289642 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
HIN86_RS11105 (HIN86_11105)	-	2289654..2290634 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
HIN86_RS11110 (HIN86_11110)	kdsB	2290646..2291407 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26601.53 Da
• Isoelectric Point: 9.5501

>NTDB_id=441277 HIN86_RS11075 WP_032000520.1 2286229..2286930(-) (xcpW) [Acinetobacter baumannii strain Ab-B004d-c]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEATKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=441277 HIN86_RS11075 WP_032000520.1 2286229..2286930(-) (xcpW) [Acinetobacter baumannii strain Ab-B004d-c]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGCCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991