Detailed information NTG0441183

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HIN88_RS10085
• Genome accession: NZ_CP051866
• Coordinates: 2141574..2142275 (-)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain Ab-C63
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2136574..2147275

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIN88_RS10055 (HIN88_10055)	-	2136880..2137323 (-)	444	WP_001246673.1	SRPBCC family protein	-
HIN88_RS10060 (HIN88_10060)	tadA	2137393..2137897 (-)	505	Protein_1952	tRNA adenosine(34) deaminase TadA	-
HIN88_RS10065 (HIN88_10065)	-	2137904..2139028 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
HIN88_RS10070 (HIN88_10070)	ung	2139025..2139738 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
HIN88_RS10075 (HIN88_10075)	-	2139789..2140385 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
HIN88_RS10080 (HIN88_10080)	gspK	2140615..2141574 (-)	960	WP_064194333.1	type II secretion system minor pseudopilin GspK	-
HIN88_RS10085 (HIN88_10085)	xcpW	2141574..2142275 (-)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HIN88_RS10090 (HIN88_10090)	xcpV	2142275..2142655 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
HIN88_RS10095 (HIN88_10095)	-	2142645..2143199 (-)	555	WP_000841373.1	type II secretion system protein	-
HIN88_RS10100 (HIN88_10100)	-	2143209..2143817 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HIN88_RS10105 (HIN88_10105)	-	2143855..2144628 (-)	774	WP_064192512.1	TatD family hydrolase	-
HIN88_RS10110 (HIN88_10110)	-	2144646..2144987 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
HIN88_RS10115 (HIN88_10115)	-	2144999..2145979 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
HIN88_RS10120 (HIN88_10120)	kdsB	2145991..2146752 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=441183 HIN88_RS10085 WP_004747380.1 2141574..2142275(-) (xcpW) [Acinetobacter baumannii strain Ab-C63]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=441183 HIN88_RS10085 WP_004747380.1 2141574..2142275(-) (xcpW) [Acinetobacter baumannii strain Ab-C63]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996