Detailed information NTG0441096

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: HIR76_RS20160
• Genome accession: NZ_CP051860
• Coordinates: 3857563..3858708 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3852563..3863708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIR76_RS20140 (HIR76_07445)	albF	3852579..3853859 (+)	1281	WP_003242974.1	pitrilysin family protein	-
HIR76_RS20145 (HIR76_07440)	albG	3853856..3854557 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
HIR76_RS20150 (HIR76_07435)	ywhL	3854563..3855939 (-)	1377	WP_003244415.1	YncE family protein	-
HIR76_RS20155 (HIR76_07430)	ywhK	3855978..3857333 (-)	1356	WP_003227552.1	YncE family protein	-
HIR76_RS22280	-	3857330..3857560 (-)	231	WP_009968328.1	hypothetical protein	-
HIR76_RS20160 (HIR76_07420)	rapF	3857563..3858708 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
HIR76_RS20165 (HIR76_07415)	phrF	3858692..3858811 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
HIR76_RS20170 (HIR76_07410)	ywhH	3858910..3859383 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
HIR76_RS20175 (HIR76_07405)	speB	3859415..3860287 (-)	873	WP_003227545.1	agmatinase	-
HIR76_RS20180 (HIR76_07400)	speE	3860348..3861178 (-)	831	WP_003227543.1	spermidine synthase	-
HIR76_RS20185 (HIR76_07395)	pbpG	3861380..3863455 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=441096 HIR76_RS20160 WP_003227549.1 3857563..3858708(+) (rapF) [Bacillus subtilis subsp. subtilis str. 168]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=441096 HIR76_RS20160 WP_003227549.1 3857563..3858708(+) (rapF) [Bacillus subtilis subsp. subtilis str. 168]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572