Detailed information NTG0441042

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: HIR76_RS06380
• Genome accession: NZ_CP051860
• Coordinates: 1238326..1239279 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1233326..1244279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIR76_RS06355 (HIR76_21260)	argF	1235158..1236117 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
HIR76_RS06360 (HIR76_21255)	yjzC	1236203..1236382 (+)	180	WP_003245356.1	YjzC family protein	-
HIR76_RS06365 (HIR76_21250)	yjzD	1236428..1236613 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
HIR76_RS06370 (HIR76_21245)	-	1236862..1237596 (+)	735	WP_003245223.1	hypothetical protein	-
HIR76_RS06375 (HIR76_21240)	-	1237678..1238235 (+)	558	WP_003232974.1	hypothetical protein	-
HIR76_RS06380 (HIR76_21235)	med	1238326..1239279 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
HIR76_RS06385 (HIR76_21230)	comZ	1239294..1239485 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
HIR76_RS06390 (HIR76_21225)	yjzB	1239515..1239754 (-)	240	WP_003232972.1	spore coat protein YjzB	-
HIR76_RS06395 (HIR76_21220)	fabH	1239919..1240857 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
HIR76_RS06400 (HIR76_21215)	fabF	1240880..1242121 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
HIR76_RS06405 (HIR76_21210)	yjaZ	1242197..1242982 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
HIR76_RS06410 (HIR76_21205)	appD	1243174..1244160 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=441042 HIR76_RS06380 WP_003245494.1 1238326..1239279(+) (med) [Bacillus subtilis subsp. subtilis str. 168]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=441042 HIR76_RS06380 WP_003245494.1 1238326..1239279(+) (med) [Bacillus subtilis subsp. subtilis str. 168]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1