Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HH212_RS11700 Genome accession   NZ_CP051685
Coordinates   2713755..2714141 (+) Length   128 a.a.
NCBI ID   WP_170202632.1    Uniprot ID   A0A7Z2VWV3
Organism   Massilia forsythiae strain GN2-R2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2708755..2719141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HH212_RS11680 (HH212_11680) - 2709749..2711041 (+) 1293 WP_170202629.1 PepSY domain-containing protein -
  HH212_RS11685 (HH212_11685) hemL 2711162..2712457 (-) 1296 WP_170202630.1 glutamate-1-semialdehyde 2,1-aminomutase -
  HH212_RS11690 (HH212_11690) - 2712517..2713242 (-) 726 WP_308633262.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  HH212_RS11695 (HH212_11695) - 2713425..2713577 (+) 153 WP_170205400.1 rubredoxin -
  HH212_RS11700 (HH212_11700) pilG 2713755..2714141 (+) 387 WP_170202632.1 PleD family two-component system response regulator Regulator
  HH212_RS11705 (HH212_11705) - 2714181..2714549 (+) 369 WP_170202633.1 response regulator transcription factor -
  HH212_RS11710 (HH212_11710) - 2714551..2715147 (+) 597 WP_170202634.1 chemotaxis protein CheW -
  HH212_RS11715 (HH212_11715) - 2715235..2717622 (+) 2388 WP_170202635.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 13872.99 Da        Isoelectric Point: 7.3212

>NTDB_id=440463 HH212_RS11700 WP_170202632.1 2713755..2714141(+) (pilG) [Massilia forsythiae strain GN2-R2]
MTTQPTGPKIMVIDDSSTIRRSAEIFLTQAGYQVVLAEDGFDALAKINDHHPALVFCDILMPRLDGYQTCALIKKSAKFH
ATPVVMLSSKDGLFDRARGAMVGSSDYLTKPFSKDSLLAAVRDHTAAA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=440463 HH212_RS11700 WP_170202632.1 2713755..2714141(+) (pilG) [Massilia forsythiae strain GN2-R2]
ATGACGACGCAACCGACAGGGCCGAAGATCATGGTGATCGACGACAGCAGCACGATCCGCCGCTCCGCCGAGATCTTCCT
GACCCAGGCCGGCTACCAGGTGGTGCTGGCCGAAGACGGCTTCGACGCGCTGGCCAAGATCAACGACCATCATCCGGCGC
TGGTGTTCTGCGACATCCTGATGCCGCGCCTGGATGGCTACCAGACCTGCGCGCTGATCAAGAAGAGCGCGAAATTCCAC
GCGACCCCGGTGGTGATGCTGTCGTCCAAGGACGGCCTGTTCGACCGCGCGCGCGGCGCCATGGTCGGCTCGTCGGACTA
TCTCACCAAGCCGTTTTCCAAGGACAGCCTGCTCGCCGCCGTGCGCGACCATACGGCCGCCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z2VWV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.025

92.969

0.586