Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   HHJ99_RS10030 Genome accession   NZ_CP051643
Coordinates   2058473..2059138 (+) Length   221 a.a.
NCBI ID   WP_044466396.1    Uniprot ID   -
Organism   Staphylococcus caprae strain SY333     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2053473..2064138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HHJ99_RS10005 (HHJ99_09985) - 2053661..2054281 (+) 621 WP_044466394.1 acetyltransferase -
  HHJ99_RS10010 (HHJ99_09990) - 2054287..2055429 (+) 1143 WP_275043206.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  HHJ99_RS10015 (HHJ99_09995) - 2055433..2056374 (+) 942 WP_044466395.1 LCP family protein -
  HHJ99_RS10020 (HHJ99_10000) - 2056472..2057956 (-) 1485 WP_044466427.1 alkaline phosphatase -
  HHJ99_RS10025 (HHJ99_10005) - 2058289..2058441 (+) 153 WP_165764690.1 hypothetical protein -
  HHJ99_RS10030 (HHJ99_10010) braR 2058473..2059138 (+) 666 WP_044466396.1 response regulator transcription factor Regulator
  HHJ99_RS10035 (HHJ99_10015) braS 2059144..2060040 (+) 897 WP_044466397.1 sensor histidine kinase Regulator
  HHJ99_RS10040 (HHJ99_10020) - 2060151..2060900 (+) 750 WP_044466398.1 ABC transporter ATP-binding protein -
  HHJ99_RS10045 (HHJ99_10025) - 2060926..2062911 (+) 1986 WP_241486237.1 FtsX-like permease family protein -
  HHJ99_RS10050 (HHJ99_10030) - 2063051..2063812 (+) 762 WP_044466400.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25491.52 Da        Isoelectric Point: 4.6277

>NTDB_id=440219 HHJ99_RS10030 WP_044466396.1 2058473..2059138(+) (braR) [Staphylococcus caprae strain SY333]
MKILIVEDDLVIAESLANELSKWNYDVKVVENFDKILEDFHEMDPQLVLLDINLPTLNGFHWCQEMRKVSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLIKEGEAVQLSLTELQILK
MLFQNEGKYVSRTTLIEKCWESENFIDDNTLAVNMTRLRKKLSSIGVDHFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=440219 HHJ99_RS10030 WP_044466396.1 2058473..2059138(+) (braR) [Staphylococcus caprae strain SY333]
ATGAAGATTCTCATTGTAGAAGACGACTTAGTGATTGCTGAAAGTTTGGCGAATGAATTGTCAAAATGGAACTACGACGT
AAAAGTGGTTGAGAATTTTGACAAAATCTTGGAAGATTTTCATGAAATGGATCCGCAGCTTGTCTTATTAGACATTAATT
TGCCCACGCTTAATGGCTTTCATTGGTGTCAAGAAATGCGTAAAGTATCCAACGTCCCTATTATGTTTATAAGTTCGCGT
ACGGATAATATGGATCAAATTATGGCAATTCAAATGGGTGGCGACGACTTTATTGAGAAGCCGTTCAACTTATCGTTAAC
CATCGCAAAGATCCAAGCTTTGCTACGACGAACATACGACCTATCAGTATCTAATGACGAATTGGATGTGAAAGGCTGTA
AACTTATCCTTGATGAAGCAAAACTAATTAAGGAAGGCGAAGCGGTTCAATTATCACTAACAGAACTTCAAATTCTGAAA
ATGCTGTTCCAAAATGAAGGTAAATATGTAAGTCGTACAACTTTAATTGAAAAATGTTGGGAATCTGAAAACTTCATCGA
TGACAATACATTAGCAGTAAATATGACACGATTACGTAAAAAATTATCATCTATCGGTGTGGATCATTTTATAGAAACAA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

82.805

100

0.828