Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   SAVC_RS13155 Genome accession   NC_016912
Coordinates   2588906..2589793 (-) Length   295 a.a.
NCBI ID   WP_000143419.1    Uniprot ID   A0A266CLT2
Organism   Staphylococcus aureus subsp. aureus VC40     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2583906..2594793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAVC_RS13120 - 2583925..2584017 (+) 93 WP_010956583.1 hypothetical protein -
  SAVC_RS13125 (SAVC_11970) - 2584125..2584622 (-) 498 WP_001065268.1 glutathione peroxidase -
  SAVC_RS13130 (SAVC_11975) - 2584632..2584892 (-) 261 WP_001789910.1 hypothetical protein -
  SAVC_RS13135 - 2585274..2585387 (-) 114 WP_011447078.1 hypothetical protein -
  SAVC_RS13145 (SAVC_11980) - 2586046..2588046 (-) 2001 WP_000776751.1 ABC transporter permease -
  SAVC_RS13150 (SAVC_11985) - 2588043..2588798 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  SAVC_RS13155 (SAVC_11990) braS 2588906..2589793 (-) 888 WP_000143419.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SAVC_RS13160 nsaR 2589804..2590470 (-) 667 Protein_2478 nisin susceptibility-associated two-component system response regulator NsaR -
  SAVC_RS13165 (SAVC_12005) - 2590496..2590696 (-) 201 WP_000604728.1 hypothetical protein -
  SAVC_RS13175 (SAVC_12010) - 2590894..2592318 (+) 1425 WP_000953744.1 alkaline phosphatase -
  SAVC_RS14615 (SAVC_12015) - 2592378..2592479 (-) 102 WP_000731972.1 SE2200 family small protein -
  SAVC_RS13180 (SAVC_12020) - 2592601..2593056 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SAVC_RS13185 (SAVC_12025) - 2593301..2594062 (-) 762 WP_000323455.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34019.28 Da        Isoelectric Point: 6.0874

>NTDB_id=44007 SAVC_RS13155 WP_000143419.1 2588906..2589793(-) (braS) [Staphylococcus aureus subsp. aureus VC40]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=44007 SAVC_RS13155 WP_000143419.1 2588906..2589793(-) (braS) [Staphylococcus aureus subsp. aureus VC40]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A266CLT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997


Multiple sequence alignment