Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   HG697_RS09850 Genome accession   NZ_CP051623
Coordinates   2004384..2005097 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1999384..2010097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HG697_RS09840 (HG697_09845) treC 2000454..2002082 (-) 1629 WP_015058125.1 alpha,alpha-phosphotrehalase -
  HG697_RS09845 (HG697_09850) treP 2002149..2004173 (-) 2025 WP_015058126.1 PTS system trehalose-specific EIIBC component -
  HG697_RS09850 (HG697_09855) treR 2004384..2005097 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  HG697_RS09855 (HG697_09860) - 2005376..2005713 (-) 338 Protein_1890 helix-turn-helix domain-containing protein -
  HG697_RS09860 (HG697_09865) - 2005900..2006756 (+) 857 Protein_1891 VOC family protein -
  HG697_RS09865 (HG697_09870) yaaA 2006798..2007529 (+) 732 WP_015058128.1 peroxide stress protein YaaA -
  HG697_RS09870 (HG697_09875) nrdG 2007703..2008317 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  HG697_RS09875 (HG697_09880) - 2008321..2008824 (-) 504 WP_152652248.1 GNAT family N-acetyltransferase -
  HG697_RS09880 (HG697_09885) - 2008833..2009768 (-) 936 WP_012767638.1 Gfo/Idh/MocA family oxidoreductase -
  HG697_RS09885 (HG697_09890) - 2009797..2009943 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=439859 HG697_RS09850 WP_002982243.1 2004384..2005097(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=439859 HG697_RS09850 WP_002982243.1 2004384..2005097(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679