Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   HG697_RS07395 Genome accession   NZ_CP051623
Coordinates   1482737..1483774 (-) Length   345 a.a.
NCBI ID   WP_015057897.1    Uniprot ID   A0A9X9R3T4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1477737..1488774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HG697_RS07370 (HG697_07375) rbsC 1477761..1478702 (-) 942 WP_022554979.1 hypothetical protein -
  HG697_RS07375 (HG697_07380) - 1478704..1480182 (-) 1479 WP_015057896.1 sugar ABC transporter ATP-binding protein -
  HG697_RS07380 (HG697_07385) rbsD 1480198..1480596 (-) 399 WP_003051896.1 D-ribose pyranase -
  HG697_RS07385 (HG697_07390) rbsK 1480571..1481482 (-) 912 WP_003061715.1 ribokinase -
  HG697_RS07390 (HG697_07395) - 1481475..1482458 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  HG697_RS07395 (HG697_07400) sepM 1482737..1483774 (-) 1038 WP_015057897.1 SepM family pheromone-processing serine protease Regulator
  HG697_RS07400 (HG697_07405) coaD 1483761..1484252 (-) 492 WP_003051905.1 pantetheine-phosphate adenylyltransferase -
  HG697_RS07405 (HG697_07410) rsmD 1484242..1484781 (-) 540 WP_041781651.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  HG697_RS07410 (HG697_07415) asnA 1484975..1485967 (-) 993 WP_003061055.1 aspartate--ammonia ligase -
  HG697_RS07415 (HG697_07420) arcC 1486294..1487244 (-) 951 WP_015057899.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37589.15 Da        Isoelectric Point: 9.4270

>NTDB_id=439846 HG697_RS07395 WP_015057897.1 1482737..1483774(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=439846 HG697_RS07395 WP_015057897.1 1482737..1483774(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGTCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGACAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.884

100

0.719