Detailed information NTG0439693

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG574_RS07355
• Genome accession: NZ_CP051541
• Coordinates: 1551508..1552950 (-)
• Length: 480 a.a.
• NCBI ID: WP_202144793.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-001
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1546508..1557950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG574_RS07330 (HG574_07310)	recG	1547640..1549511 (-)	1872	WP_202144791.1	ATP-dependent DNA helicase RecG	-
HG574_RS07335 (HG574_07315)	-	1549593..1549940 (+)	348	WP_000837036.1	hypothetical protein	-
HG574_RS07340 (HG574_07320)	-	1549944..1550579 (+)	636	WP_000668060.1	outer membrane protein	-
HG574_RS07345 (HG574_07325)	-	1550576..1551328 (-)	753	WP_202144792.1	exodeoxyribonuclease III	-
HG574_RS07355 (HG574_07335)	comH	1551508..1552950 (-)	1443	WP_202144793.1	competence protein	Machinery gene
HG574_RS07360 (HG574_07340)	dnaA	1553179..1554552 (-)	1374	WP_202144794.1	chromosomal replication initiator protein DnaA	-
HG574_RS07365 (HG574_07345)	-	1554706..1555248 (+)	543	WP_197300630.1	purine-nucleoside phosphorylase	-
HG574_RS07370 (HG574_07350)	-	1555283..1555522 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HG574_RS07375 (HG574_07355)	glmS	1555523..1557316 (+)	1794	WP_202144795.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54730.61 Da
• Isoelectric Point: 7.0707

>NTDB_id=439693 HG574_RS07355 WP_202144793.1 1551508..1552950(-) (comH) [Helicobacter pylori strain LIM-001]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISSNKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSQDQENNLFVVPPTEKTLPNNNTSNADASENNENNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=439693 HG574_RS07355 WP_202144793.1 1551508..1552950(-) (comH) [Helicobacter pylori strain LIM-001]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAGGTTTTAGGCATTT
ATAATATCTCCTCAAACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTTTTTGTAGTGCCACCCACTGAAAAAACGCTCCCTAATAACAACACCTCTAACGCTGATG
CGAGTGAAAACAATGAAAACAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAAGAATTC
GCATGCGGAAAATGGGTTTATGACGATGAAAATCTACAAGCTTACCGCCCAAGCATTTTAAAACGCGTTGATAAAGATAA
AGAAGTTACAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTCCAAGCC
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACG
ACCAAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAG
TGAATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAGCAACCAC
GAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTT
TGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.875	100	0.919