Detailed information NTG0439673

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG575_RS07270
• Genome accession: NZ_CP051540
• Coordinates: 1529124..1530563 (-)
• Length: 479 a.a.
• NCBI ID: WP_202248193.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-002
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1524124..1535563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG575_RS07245 (HG575_07245)	recG	1525255..1527126 (-)	1872	WP_202248189.1	ATP-dependent DNA helicase RecG	-
HG575_RS07250 (HG575_07250)	-	1527208..1527555 (+)	348	WP_000837038.1	hypothetical protein	-
HG575_RS07255 (HG575_07255)	-	1527559..1528194 (+)	636	WP_033742844.1	outer membrane protein	-
HG575_RS07260 (HG575_07260)	-	1528191..1528943 (-)	753	WP_202248191.1	exodeoxyribonuclease III	-
HG575_RS07270 (HG575_07270)	comH	1529124..1530563 (-)	1440	WP_202248193.1	competence protein	Machinery gene
HG575_RS07275 (HG575_07275)	dnaA	1530784..1532151 (-)	1368	WP_202248195.1	chromosomal replication initiator protein DnaA	-
HG575_RS07280 (HG575_07280)	-	1532305..1532847 (+)	543	WP_202248197.1	purine-nucleoside phosphorylase	-
HG575_RS07285 (HG575_07285)	-	1532882..1533121 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HG575_RS07290 (HG575_07290)	glmS	1533122..1534915 (+)	1794	WP_202248199.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54912.78 Da
• Isoelectric Point: 6.6636

>NTDB_id=439673 HG575_RS07270 WP_202248193.1 1529124..1530563(-) (comH) [Helicobacter pylori strain LIM-002]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEVHAHQMPSLNAPMQKPQNKPHSSQQPPQNFSYPEPKLGSKNSKNSLLQPL
ITPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNDTSNADTNENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDRQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQAEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439673 HG575_RS07270 WP_202248193.1 1529124..1530563(-) (comH) [Helicobacter pylori strain LIM-002]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATTTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGTGCACGCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAATAAGCCCCATTCATCGC
AACAACCTCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
ATAACTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACGACACCTCTAACGCTGATACTA
ATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCCAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAGACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAGCGCCCCAAACAAGACGATC
AAGCAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAACGAATTG
AACTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.242	100	0.962