Detailed information NTG0439650

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG576_RS07345
• Genome accession: NZ_CP051539
• Coordinates: 1554748..1556187 (-)
• Length: 479 a.a.
• NCBI ID: WP_202138848.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-003
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1549748..1561187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG576_RS07320 (HG576_07310)	recG	1550887..1552758 (-)	1872	WP_202138846.1	ATP-dependent DNA helicase RecG	-
HG576_RS07325 (HG576_07315)	-	1552835..1553182 (+)	348	WP_000837036.1	hypothetical protein	-
HG576_RS07330 (HG576_07320)	-	1553186..1553821 (+)	636	WP_079338605.1	outer membrane protein	-
HG576_RS07335 (HG576_07325)	-	1553818..1554570 (-)	753	WP_202138847.1	exodeoxyribonuclease III	-
HG576_RS07345 (HG576_07335)	comH	1554748..1556187 (-)	1440	WP_202138848.1	competence protein	Machinery gene
HG576_RS07350 (HG576_07340)	dnaA	1556416..1557789 (-)	1374	WP_202138849.1	chromosomal replication initiator protein DnaA	-
HG576_RS07355 (HG576_07345)	-	1557943..1558485 (+)	543	WP_202138850.1	purine-nucleoside phosphorylase	-
HG576_RS07360 (HG576_07350)	-	1558530..1558769 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG576_RS07365 (HG576_07355)	glmS	1558770..1560563 (+)	1794	WP_078264770.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54790.82 Da
• Isoelectric Point: 6.8239

>NTDB_id=439650 HG576_RS07345 WP_202138848.1 1554748..1556187(-) (comH) [Helicobacter pylori strain LIM-003]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLKPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQPPQNFSYPEPKPGSKNSKNSLLQPL
VTPSKISPTNETQTPTNDTKPPLKHSLEDQENNLFVAPPTEKTLPSNTPNADINESNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439650 HG576_RS07345 WP_202138848.1 1554748..1556187(-) (comH) [Helicobacter pylori strain LIM-003]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAAGCCTAATCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCACACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCTAGTTCATCGC
AACAACCTCCTCAAAACTTTTCTTACCCAGAGCCCAAACCAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCCAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTT
AGAAGATCAAGAAAACAACCTTTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAGTAACACCCCTAATGCTGATATTA
ATGAAAGCAATGAAAGTAACGAAAATAGGGACAATGTGGAAAAACAAGCCATTAGAGATCCTAATATCAAGGAATTCGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATCTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGAGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.407	100	0.954