Detailed information NTG0439631

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG578_RS07200
• Genome accession: NZ_CP051537
• Coordinates: 1532035..1533477 (-)
• Length: 480 a.a.
• NCBI ID: WP_202134747.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-005
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1527035..1538477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG578_RS07175 (HG578_07160)	recG	1528166..1530037 (-)	1872	WP_202134745.1	ATP-dependent DNA helicase RecG	-
HG578_RS07180 (HG578_07165)	-	1530119..1530466 (+)	348	WP_053576538.1	hypothetical protein	-
HG578_RS07185 (HG578_07170)	-	1530470..1531105 (+)	636	WP_000668041.1	outer membrane protein	-
HG578_RS07190 (HG578_07175)	-	1531102..1531854 (-)	753	WP_078251336.1	exodeoxyribonuclease III	-
HG578_RS07200 (HG578_07185)	comH	1532035..1533477 (-)	1443	WP_202134747.1	competence protein	Machinery gene
HG578_RS07205 (HG578_07190)	dnaA	1533706..1535079 (-)	1374	WP_202134748.1	chromosomal replication initiator protein DnaA	-
HG578_RS07210 (HG578_07195)	-	1535232..1535774 (+)	543	WP_202134749.1	purine-nucleoside phosphorylase	-
HG578_RS07215 (HG578_07200)	-	1535817..1536056 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HG578_RS07220 (HG578_07205)	glmS	1536057..1537850 (+)	1794	WP_202134750.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54729.54 Da
• Isoelectric Point: 6.6979

>NTDB_id=439631 HG578_RS07200 WP_202134747.1 1532035..1533477(-) (comH) [Helicobacter pylori strain LIM-005]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISSNKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQPSQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSQDQENNLFVVPPTEKTLPNNNTSNADASENNENNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITQNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVHFKEGVCMALEIEEQSRAKSTPLSIENSRVVCVKRGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=439631 HG578_RS07200 WP_202134747.1 1532035..1533477(-) (comH) [Helicobacter pylori strain LIM-005]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAGGTTTTAGGCATTT
ATAATATCTCCTCAAACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAACCTTCCCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTTTTTGTAGTGCCACCCACTGAAAAAACGCTCCCTAATAACAACACCTCTAACGCTGATG
CGAGTGAAAACAATGAAAACAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAAGAATTC
GCATGCGGGAAGTGGGTTTATGACGATGAAAATCTACAAGCTTACCGCCCAAGCATTTTAAAACGCGTTGATAAAGATAA
AGAAGTTACAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTCCAAGCC
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCATGGGAGAGTGAGTATGAAATCACTACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACG
ATCAAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAACGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
CGAATACAAAGAATGGGTTAAAAACCATGTGCACTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAGCAGTCAC
GAGCCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTTGTGTGTGTCAAAAGGGGGAATTATTTATTCAACGAAGTT
TGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.667	100	0.917