Detailed information NTG0439611

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG580_RS07490
• Genome accession: NZ_CP051536
• Coordinates: 1568019..1569458 (-)
• Length: 479 a.a.
• NCBI ID: WP_202145828.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-007
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1563019..1574458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG580_RS07465	recG	1564160..1566031 (-)	1872	WP_202145824.1	ATP-dependent DNA helicase RecG	-
HG580_RS07470	-	1566113..1566457 (+)	345	WP_202145825.1	hypothetical protein	-
HG580_RS07475	-	1566466..1567092 (+)	627	WP_202145826.1	outer membrane protein	-
HG580_RS07480	-	1567089..1567841 (-)	753	WP_202145827.1	exodeoxyribonuclease III	-
HG580_RS07490	comH	1568019..1569458 (-)	1440	WP_202145828.1	competence protein	Machinery gene
HG580_RS07495	dnaA	1569686..1571053 (-)	1368	WP_202145829.1	chromosomal replication initiator protein DnaA	-
HG580_RS07500	-	1571206..1571748 (+)	543	WP_000923113.1	purine-nucleoside phosphorylase	-
HG580_RS07505	-	1571784..1572023 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG580_RS07510	glmS	1572024..1573817 (+)	1794	WP_202145830.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54961.96 Da
• Isoelectric Point: 7.4338

>NTDB_id=439611 HG580_RS07490 WP_202145828.1 1568019..1569458(-) (comH) [Helicobacter pylori strain LIM-007]
MKKTLCLSFFLTFSNPLQALVIELLEEIKASPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETILNPNRPTIPKNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSPQNFSYPESKLGSKNSKNSLLQPL
ITPSKISPTNETQTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAIRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDKDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRSRTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439611 HG580_RS07490 WP_202145828.1 1568019..1569458(-) (comH) [Helicobacter pylori strain LIM-007]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCTCTTGTGATCGAGCTTTTAGAAGA
AATCAAAGCTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGATCTTAAACCCTAACCGCCCTACTATTCCCAAAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
ATAACTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCATTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGAAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAACCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGTCCAGAACACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATC
AAGTAGAACCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACACCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.693	100	0.927