Detailed information NTG0439608

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: HG580_RS06710
• Genome accession: NZ_CP051536
• Coordinates: 1398431..1399744 (-)
• Length: 437 a.a.
• NCBI ID: WP_202145722.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-007
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1393431..1404744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG580_RS06680	nadC	1393894..1394715 (-)	822	WP_202145718.1	carboxylating nicotinate-nucleotide diphosphorylase	-
HG580_RS06685	nadA	1394715..1395725 (-)	1011	WP_096467851.1	quinolinate synthase NadA	-
HG580_RS06690	-	1395715..1396518 (-)	804	WP_202145719.1	phosphatidylserine decarboxylase	-
HG580_RS06695	-	1396515..1397018 (-)	504	WP_202145720.1	helix-turn-helix domain-containing protein	-
HG580_RS06700	-	1397031..1397525 (-)	495	WP_202145721.1	hypothetical protein	-
HG580_RS06705	mqnP	1397518..1398402 (-)	885	WP_000913954.1	menaquinone biosynthesis prenyltransferase MqnP	-
HG580_RS06710	comEC/comE3	1398431..1399744 (-)	1314	WP_202145722.1	ComEC/Rec2 family competence protein	Machinery gene
HG580_RS06715	-	1399741..1401207 (-)	1467	WP_202145723.1	replicative DNA helicase	-
HG580_RS06720	-	1401218..1402612 (-)	1395	WP_202145724.1	NAD(P)H-hydrate dehydratase	-
HG580_RS06725	crdS	1402615..1403817 (-)	1203	WP_202146410.1	copper-sensing histidine kinase CrdS	-
HG580_RS06730	crdR	1403783..1404424 (-)	642	WP_202145725.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50276.32 Da
• Isoelectric Point: 9.8918

>NTDB_id=439608 HG580_RS06710 WP_202145722.1 1398431..1399744(-) (comEC/comE3) [Helicobacter pylori strain LIM-007]
MKDKTFQGAFELLTTPKEYLLCGVILSLLLALNLYLEYLNYQKLDFLKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRYAQFFGKIKPCSFLESLRSCFFQTYSFSLTRKQDFKSHWRRFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLVRSFQVISLS
ALVFLNMLIIAHAFFPMFSPYQLFSVPLGLIFIVFFPLSLFLHTVGLGSLLDPILNMPLTIPTISISSPLWLLGVHLFLT
ILSVRFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=439608 HG580_RS06710 WP_202145722.1 1398431..1399744(-) (comEC/comE3) [Helicobacter pylori strain LIM-007]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTGTTGTGTGGGGTTATTTTAAG
CCTTTTGTTAGCGCTCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTTAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATT
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTACGCGCAATTTTTTGGCAAAATCAAACCTTGTTC
GTTTTTGGAGTCTTTAAGATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGGAAACAAGATTTCAAATCGCATT
GGCGCCGTTTCATTGATAGCGCTCATTCAAACGCTTTAGTGGGTAATTTATATCGCGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAGCTTTTGATTTTAGCGTG
TTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGTGCGATCTTTTCAGGTCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTTATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCGTTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATACTGTGGGTTTGGGGTCTTTGTTAGATCCCA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCAATCTCTTCGCCTTTATGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTCTAAGCGTGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTGAGTGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-401)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.508	100	0.945