Detailed information NTG0439590

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG581_RS07140
• Genome accession: NZ_CP051535
• Coordinates: 1503960..1505399 (+)
• Length: 479 a.a.
• NCBI ID: WP_202137937.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-008
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1498960..1510399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG581_RS07120 (HG581_07130)	glmS	1499583..1501376 (-)	1794	WP_202137934.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HG581_RS07125 (HG581_07135)	-	1501377..1501616 (-)	240	WP_000461832.1	DUF2443 domain-containing protein	-
HG581_RS07130 (HG581_07140)	-	1501661..1502203 (-)	543	WP_202137935.1	purine-nucleoside phosphorylase	-
HG581_RS07135 (HG581_07145)	dnaA	1502358..1503731 (+)	1374	WP_202137936.1	chromosomal replication initiator protein DnaA	-
HG581_RS07140 (HG581_07150)	comH	1503960..1505399 (+)	1440	WP_202137937.1	competence protein	Machinery gene
HG581_RS07150 (HG581_07160)	-	1505579..1506331 (+)	753	WP_202137938.1	exodeoxyribonuclease III	-
HG581_RS07155 (HG581_07165)	-	1506328..1506963 (-)	636	WP_202137939.1	outer membrane protein	-
HG581_RS07160 (HG581_07170)	-	1506967..1507314 (-)	348	WP_000837036.1	hypothetical protein	-
HG581_RS07165 (HG581_07175)	recG	1507396..1509267 (+)	1872	WP_202137940.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54879.84 Da
• Isoelectric Point: 7.0005

>NTDB_id=439590 HG581_RS07140 WP_202137937.1 1503960..1505399(+) (comH) [Helicobacter pylori strain LIM-008]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSQDQENNLFVAPPTEKTLPNNTSNADIDENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDADRQTTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439590 HG581_RS07140 WP_202137937.1 1503960..1505399(+) (comH) [Helicobacter pylori strain LIM-008]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAACTGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACCGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTG
ATGAAAATAATGAAAGCAATGAGAATAGAGACAATGTGGAAAAACAAGCCATTAGAGATCCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCGAGCATTTTAAAACGCGTTGATGCAGACAGACA
GACTACGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACGGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAACGAATTG
AACTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	97.077	100	0.971