Detailed information NTG0439567

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG582_RS06980
• Genome accession: NZ_CP051534
• Coordinates: 1456545..1457984 (+)
• Length: 479 a.a.
• NCBI ID: WP_202143825.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-009
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1451545..1462984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG582_RS06960 (HG582_06965)	glmS	1452180..1453973 (-)	1794	WP_202143822.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HG582_RS06965 (HG582_06970)	-	1453974..1454213 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HG582_RS06970 (HG582_06975)	-	1454248..1454790 (-)	543	WP_202143823.1	purine-nucleoside phosphorylase	-
HG582_RS06975 (HG582_06980)	dnaA	1454943..1456316 (+)	1374	WP_202143824.1	chromosomal replication initiator protein DnaA	-
HG582_RS06980 (HG582_06985)	comH	1456545..1457984 (+)	1440	WP_202143825.1	competence protein	Machinery gene
HG582_RS06990 (HG582_06995)	-	1458164..1458916 (+)	753	WP_000767577.1	exodeoxyribonuclease III	-
HG582_RS06995 (HG582_07000)	-	1458913..1459548 (-)	636	WP_000765633.1	outer membrane protein	-
HG582_RS07000 (HG582_07005)	-	1459552..1459899 (-)	348	WP_040163310.1	hypothetical protein	-
HG582_RS07005 (HG582_07010)	recG	1459981..1461852 (+)	1872	WP_202143826.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54746.76 Da
• Isoelectric Point: 6.9526

>NTDB_id=439567 HG582_RS06980 WP_202143825.1 1456545..1457984(+) (comH) [Helicobacter pylori strain LIM-009]
MKKILCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKESHAHQMPSLNAPMQKPQNKPSSSQQSPQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNEVKTPTNDAKPPLKHSSEDQENNLFITPPTEKTLPSNTPNTDASESNENNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQAEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439567 HG582_RS06980 WP_202143825.1 1456545..1457984(+) (comH) [Helicobacter pylori strain LIM-009]
ATGAAAAAAATCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCACCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCTAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGCCCAAATTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACGCCAAACCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAGTAACACTCCTAACACTGATGCGA
GTGAAAGCAATGAAAATAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCCAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACCAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACGGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGCAGAGCCGACTTTTTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATTAAAGAAAGCAGCGA
ATACAAGGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.407	100	0.954