Detailed information NTG0439548

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG583_RS07885
• Genome accession: NZ_CP051533
• Coordinates: 1659680..1661122 (-)
• Length: 480 a.a.
• NCBI ID: WP_202142924.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-010
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1654680..1666122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG583_RS07860 (HG583_07835)	recG	1655812..1657683 (-)	1872	WP_202142922.1	ATP-dependent DNA helicase RecG	-
HG583_RS07865 (HG583_07840)	-	1657765..1658112 (+)	348	WP_000837025.1	hypothetical protein	-
HG583_RS07870 (HG583_07845)	-	1658116..1658751 (+)	636	WP_000668060.1	outer membrane protein	-
HG583_RS07875 (HG583_07850)	-	1658748..1659500 (-)	753	WP_202142923.1	exodeoxyribonuclease III	-
HG583_RS07885 (HG583_07860)	comH	1659680..1661122 (-)	1443	WP_202142924.1	competence protein	Machinery gene
HG583_RS07890 (HG583_07865)	dnaA	1661352..1662719 (-)	1368	WP_202142925.1	chromosomal replication initiator protein DnaA	-
HG583_RS07895 (HG583_07870)	-	1662872..1663414 (+)	543	WP_202142926.1	purine-nucleoside phosphorylase	-
HG583_RS07900 (HG583_07875)	-	1663450..1663689 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG583_RS07905 (HG583_07880)	glmS	1663690..1665483 (+)	1794	WP_202142927.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54767.64 Da
• Isoelectric Point: 7.1208

>NTDB_id=439548 HG583_RS07885 WP_202142924.1 1659680..1661122(-) (comH) [Helicobacter pylori strain LIM-010]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKGSPTNEVKTPTNDANPPLKHSSQDQENNLFVTPPTEKTLPNNNTPNADANENNESNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMTLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=439548 HG583_RS07885 WP_202142924.1 1659680..1661122(-) (comH) [Helicobacter pylori strain LIM-010]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAAGTTTTGGGCATTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCTCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATTCCCAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCACACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGGAAGCCCTACTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAATAACAACACCCCTAACGCTGATG
CGAATGAAAACAATGAAAGTAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTC
GCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAGATCATTACCCCTTATACTA
AAATTTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCC
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAACC
CTTAAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACG
ATCAAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGTAG
CGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGACCTTAGAAATAGAAGAGCAACCAC
GAGCTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.083	100	0.921