Detailed information NTG0439424

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HGK51_RS07400
• Genome accession: NZ_CP051511
• Coordinates: 1532881..1534320 (-)
• Length: 479 a.a.
• NCBI ID: WP_202170762.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-006
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1527881..1539320

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGK51_RS07375 (HGK51_07355)	recG	1529017..1530888 (-)	1872	WP_202170761.1	ATP-dependent DNA helicase RecG	-
HGK51_RS07380 (HGK51_07360)	-	1530970..1531314 (+)	345	WP_000837011.1	hypothetical protein	-
HGK51_RS07385 (HGK51_07365)	-	1531318..1531953 (+)	636	WP_000668049.1	outer membrane protein	-
HGK51_RS07390 (HGK51_07370)	-	1531950..1532702 (-)	753	WP_000767491.1	exodeoxyribonuclease III	-
HGK51_RS07400 (HGK51_07380)	comH	1532881..1534320 (-)	1440	WP_202170762.1	competence protein	Machinery gene
HGK51_RS07405 (HGK51_07385)	dnaA	1534549..1535916 (-)	1368	WP_202170763.1	chromosomal replication initiator protein DnaA	-
HGK51_RS07410 (HGK51_07390)	-	1536068..1536604 (+)	537	WP_202170764.1	purine-nucleoside phosphorylase	-
HGK51_RS07415 (HGK51_07395)	-	1536651..1536890 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HGK51_RS07420 (HGK51_07400)	glmS	1536891..1538684 (+)	1794	WP_202170765.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55009.06 Da
• Isoelectric Point: 6.9525

>NTDB_id=439424 HGK51_RS07400 WP_202170762.1 1532881..1534320(-) (comH) [Helicobacter pylori strain ASHA-006]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTSNADINEHNESNENRDNAEKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439424 HGK51_RS07400 WP_202170762.1 1532881..1534320(-) (comH) [Helicobacter pylori strain ASHA-006]
ATGAAAAAAACCCTTTGTTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGTACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAGCGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGATTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTCTATGAAACCAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.858	100	0.919