Detailed information NTG0439383

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG558_RS07390
• Genome accession: NZ_CP051509
• Coordinates: 1528773..1530212 (-)
• Length: 479 a.a.
• NCBI ID: WP_202166660.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-009
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1523773..1535212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG558_RS07365 (HG558_07340)	recG	1524910..1526781 (-)	1872	WP_202166658.1	ATP-dependent DNA helicase RecG	-
HG558_RS07370 (HG558_07345)	-	1526863..1527207 (+)	345	WP_000837011.1	hypothetical protein	-
HG558_RS07375 (HG558_07350)	-	1527211..1527846 (+)	636	WP_000668049.1	outer membrane protein	-
HG558_RS07380 (HG558_07355)	-	1527843..1528595 (-)	753	WP_202166659.1	exodeoxyribonuclease III	-
HG558_RS07390 (HG558_07365)	comH	1528773..1530212 (-)	1440	WP_202166660.1	competence protein	Machinery gene
HG558_RS07395 (HG558_07370)	dnaA	1530441..1531808 (-)	1368	WP_202166661.1	chromosomal replication initiator protein DnaA	-
HG558_RS07400 (HG558_07375)	-	1531962..1532504 (+)	543	WP_202167108.1	purine-nucleoside phosphorylase	-
HG558_RS07405 (HG558_07380)	-	1532540..1532779 (+)	240	WP_000461848.1	DUF2443 domain-containing protein	-
HG558_RS07410 (HG558_07385)	glmS	1532780..1534573 (+)	1794	WP_202166662.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54922.92 Da
• Isoelectric Point: 7.1642

>NTDB_id=439383 HG558_RS07390 WP_202166660.1 1528773..1530212(-) (comH) [Helicobacter pylori strain ASHA-009]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRSTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATPNKTSPANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439383 HG558_RS07390 WP_202166660.1 1528773..1530212(-) (comH) [Helicobacter pylori strain ASHA-009]
ATGAAAAAAACCCTTTGTTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCTCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAACAAGCCCCGCTAATGAAGTTAAAACGCCAACAAACGATACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGCGCAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTCTATGAAACCAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTGAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.067	100	0.921