Detailed information NTG0439363

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG559_RS07445
• Genome accession: NZ_CP051508
• Coordinates: 1552356..1553795 (-)
• Length: 479 a.a.
• NCBI ID: WP_202132846.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-010
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1547356..1558795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG559_RS07420 (HG559_07425)	recG	1548492..1550363 (-)	1872	WP_202132843.1	ATP-dependent DNA helicase RecG	-
HG559_RS07425 (HG559_07430)	-	1550445..1550789 (+)	345	WP_202132844.1	hypothetical protein	-
HG559_RS07430 (HG559_07435)	-	1550793..1551428 (+)	636	WP_202132845.1	outer membrane protein	-
HG559_RS07435 (HG559_07440)	-	1551425..1552177 (-)	753	WP_202166002.1	exodeoxyribonuclease III	-
HG559_RS07445 (HG559_07450)	comH	1552356..1553795 (-)	1440	WP_202132846.1	competence protein	Machinery gene
HG559_RS07450 (HG559_07455)	dnaA	1554024..1555391 (-)	1368	WP_202166004.1	chromosomal replication initiator protein DnaA	-
HG559_RS07455 (HG559_07460)	-	1555543..1556079 (+)	537	WP_202166006.1	purine-nucleoside phosphorylase	-
HG559_RS07460 (HG559_07465)	-	1556126..1556365 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG559_RS07465 (HG559_07470)	glmS	1556366..1558159 (+)	1794	WP_202135556.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55024.03 Da
• Isoelectric Point: 6.7663

>NTDB_id=439363 HG559_RS07445 WP_202132846.1 1552356..1553795(-) (comH) [Helicobacter pylori strain ASHA-010]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439363 HG559_RS07445 WP_202132846.1 1552356..1553795(-) (comH) [Helicobacter pylori strain ASHA-010]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.902	100	0.929