Detailed information NTG0439299

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG562_RS07560
• Genome accession: NZ_CP051505
• Coordinates: 1586959..1588392 (-)
• Length: 477 a.a.
• NCBI ID: WP_000751670.1
• Uniprot ID: A0AAE7P6A4
• Organism: Helicobacter pylori strain SHIM-010
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1581959..1593392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG562_RS07535 (HG562_07535)	recG	1583102..1584967 (-)	1866	WP_001158333.1	ATP-dependent DNA helicase RecG	-
HG562_RS07540 (HG562_07540)	-	1585049..1585393 (+)	345	WP_000837020.1	hypothetical protein	-
HG562_RS07545 (HG562_07545)	-	1585397..1586032 (+)	636	WP_000668049.1	outer membrane protein	-
HG562_RS07550 (HG562_07550)	-	1586029..1586781 (-)	753	WP_000767499.1	exodeoxyribonuclease III	-
HG562_RS07560 (HG562_07560)	comH	1586959..1588392 (-)	1434	WP_000751670.1	hypothetical protein	Machinery gene
HG562_RS07565 (HG562_07565)	dnaA	1588612..1589979 (-)	1368	WP_000380574.1	chromosomal replication initiator protein DnaA	-
HG562_RS07570 (HG562_07570)	-	1590132..1590668 (+)	537	WP_014662167.1	purine-nucleoside phosphorylase	-
HG562_RS07575 (HG562_07575)	-	1590715..1590954 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG562_RS07580 (HG562_07580)	glmS	1590955..1592748 (+)	1794	WP_000334329.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54705.53 Da
• Isoelectric Point: 7.1210

>NTDB_id=439299 HG562_RS07560 WP_000751670.1 1586959..1588392(-) (comH) [Helicobacter pylori strain SHIM-010]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPLAT
PNKTSSANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAVRDPNVREFACG
KWVYDDENLQAYRPSILKRVDENKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQTEPTFYETSELAYSSTRKSEITRNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=439299 HG562_RS07560 WP_000751670.1 1586959..1588392(-) (comH) [Helicobacter pylori strain SHIM-010]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCCAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGCAACAAC
CTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAACAAGTTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTCACAAGA
TCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTAATGAAC
ACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAGCGCGTTGATGAAAACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATCAAACAG
AGCCGACTTTCTATGAAACCAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.649	100	0.92