Detailed information NTG0439255

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG564_RS07285
• Genome accession: NZ_CP051503
• Coordinates: 1528236..1529669 (-)
• Length: 477 a.a.
• NCBI ID: WP_202171853.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain SHIM-014
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1523236..1534669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG564_RS07260 (HG564_07245)	recG	1524373..1526244 (-)	1872	WP_202171851.1	ATP-dependent DNA helicase RecG	-
HG564_RS07265 (HG564_07250)	-	1526326..1526670 (+)	345	WP_202171852.1	hypothetical protein	-
HG564_RS07270 (HG564_07255)	-	1526674..1527309 (+)	636	WP_000668049.1	outer membrane protein	-
HG564_RS07275 (HG564_07260)	-	1527306..1528058 (-)	753	WP_000767491.1	exodeoxyribonuclease III	-
HG564_RS07285 (HG564_07270)	comH	1528236..1529669 (-)	1434	WP_202171853.1	competence protein	Machinery gene
HG564_RS07290 (HG564_07275)	dnaA	1529890..1531257 (-)	1368	WP_202171854.1	chromosomal replication initiator protein DnaA	-
HG564_RS07295 (HG564_07280)	-	1531409..1531945 (+)	537	WP_202171855.1	purine-nucleoside phosphorylase	-
HG564_RS07300 (HG564_07285)	-	1531992..1532231 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG564_RS07305 (HG564_07290)	glmS	1532232..1534025 (+)	1794	WP_202171856.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54742.68 Da
• Isoelectric Point: 7.1209

>NTDB_id=439255 HG564_RS07285 WP_202171853.1 1528236..1529669(-) (comH) [Helicobacter pylori strain SHIM-014]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTVIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLGSKNPKNSLLQPLAT
PNKTSSANEVKTPTNDTKPPLKHPSEDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAIRDPNVREFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEDPQTFEAKNNFTILQARSS
TEKCKRARTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQTEPTFYEISELAYSSTRKSEITRNELNL
NEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=439255 HG564_RS07285 WP_202171853.1 1528236..1529669(-) (comH) [Helicobacter pylori strain SHIM-014]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGTAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCCAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGCAACAAC
CTCTTCAAAACTTTTCTTATCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAACAAGTTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATCCTTCAGAAGA
TCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTAATGAAC
ACAATGAAAGCAATGAGAATAGGGATAATGCGCAAAAACAAGCCATTAGAGATCCTAATGTTAGAGAATTTGCATGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCAAAAAACAGAGCCTTTAGAAGATCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCCAGAACGCGAAAAGACGGCACGACTAGACAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAAAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATCAAACAG
AGCCGACTTTCTATGAAATCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.441	100	0.918