Detailed information NTG0439234

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG565_RS07405
• Genome accession: NZ_CP051502
• Coordinates: 1558432..1559871 (-)
• Length: 479 a.a.
• NCBI ID: WP_202169436.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-001
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1553432..1564871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG565_RS07380 (HG565_07360)	recG	1554564..1556435 (-)	1872	WP_202169432.1	ATP-dependent DNA helicase RecG	-
HG565_RS07385 (HG565_07365)	-	1556517..1556870 (+)	354	WP_202169433.1	hypothetical protein	-
HG565_RS07390 (HG565_07370)	-	1556879..1557505 (+)	627	WP_202169434.1	outer membrane protein	-
HG565_RS07395 (HG565_07375)	-	1557502..1558254 (-)	753	WP_202169435.1	exodeoxyribonuclease III	-
HG565_RS07405 (HG565_07385)	comH	1558432..1559871 (-)	1440	WP_202169436.1	competence protein	Machinery gene
HG565_RS07410 (HG565_07390)	dnaA	1560106..1561473 (-)	1368	WP_202169437.1	chromosomal replication initiator protein DnaA	-
HG565_RS07415 (HG565_07395)	-	1561627..1562163 (+)	537	WP_202169438.1	purine-nucleoside phosphorylase	-
HG565_RS07420 (HG565_07400)	-	1562210..1562449 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG565_RS07425 (HG565_07405)	glmS	1562450..1564243 (+)	1794	WP_202169439.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54972.99 Da
• Isoelectric Point: 7.6512

>NTDB_id=439234 HG565_RS07405 WP_202169436.1 1558432..1559871(-) (comH) [Helicobacter pylori strain PUNO-001]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTSSQQSLQNFSYPESKLGSKNPKNSLLQPL
ATPNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINERNENNENRDNAQKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKIITPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCIKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439234 HG565_RS07405 WP_202169436.1 1558432..1559871(-) (comH) [Helicobacter pylori strain PUNO-001]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCCTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAACCTTTA
GCCACTCCTAATAAAACAAGCCTCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTTTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACGCAATGAAAACAATGAGAATAGGGATAATGCACAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCA
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGTGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGTTCTACAGAAAAATGCAAAAGGGCTAGAGCACGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTATCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.858	100	0.919