Detailed information NTG0439213

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG566_RS07105
• Genome accession: NZ_CP051501
• Coordinates: 1485075..1486514 (-)
• Length: 479 a.a.
• NCBI ID: WP_202164458.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-002
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1480075..1491514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG566_RS07080 (HG566_07090)	recG	1481206..1483077 (-)	1872	WP_202164456.1	ATP-dependent DNA helicase RecG	-
HG566_RS07085 (HG566_07095)	-	1483159..1483503 (+)	345	WP_202164457.1	hypothetical protein	-
HG566_RS07090 (HG566_07100)	-	1483507..1484142 (+)	636	WP_000649617.1	outer membrane protein	-
HG566_RS07095 (HG566_07105)	-	1484139..1484891 (-)	753	WP_000767497.1	exodeoxyribonuclease III	-
HG566_RS07105 (HG566_07115)	comH	1485075..1486514 (-)	1440	WP_202164458.1	competence protein	Machinery gene
HG566_RS07110 (HG566_07120)	dnaA	1486735..1488102 (-)	1368	WP_202164459.1	chromosomal replication initiator protein DnaA	-
HG566_RS07115 (HG566_07125)	-	1488254..1488790 (+)	537	WP_202164460.1	purine-nucleoside phosphorylase	-
HG566_RS07120 (HG566_07130)	-	1488837..1489076 (+)	240	WP_000461841.1	DUF2443 family protein	-
HG566_RS07125 (HG566_07135)	glmS	1489077..1490870 (+)	1794	WP_202164461.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54947.00 Da
• Isoelectric Point: 7.4071

>NTDB_id=439213 HG566_RS07105 WP_202164458.1 1485075..1486514(-) (comH) [Helicobacter pylori strain PUNO-002]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINERNESNENKDNAQKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESNEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439213 HG566_RS07105 WP_202164458.1 1485075..1486514(-) (comH) [Helicobacter pylori strain PUNO-002]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCTAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTTGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACGCAATGAAAGCAATGAGAATAAGGATAATGCGCAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTCTATGAAACTAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAATGA
ATACAAAGAATGGGTTAAAAACCATGTGCGTTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.693	100	0.927