Detailed information NTG0439191

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG567_RS06970
• Genome accession: NZ_CP051500
• Coordinates: 1466911..1468350 (+)
• Length: 479 a.a.
• NCBI ID: WP_202139617.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-003
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1461911..1473350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG567_RS06950 (HG567_06925)	glmS	1462544..1464337 (-)	1794	WP_202139614.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HG567_RS06955 (HG567_06930)	-	1464338..1464577 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HG567_RS06960 (HG567_06935)	-	1464622..1465164 (-)	543	WP_202163784.1	purine-nucleoside phosphorylase	-
HG567_RS06965 (HG567_06940)	dnaA	1465317..1466690 (+)	1374	WP_202163785.1	chromosomal replication initiator protein DnaA	-
HG567_RS06970 (HG567_06945)	comH	1466911..1468350 (+)	1440	WP_202139617.1	competence protein	Machinery gene
HG567_RS06980 (HG567_06955)	-	1468530..1469282 (+)	753	WP_100961575.1	exodeoxyribonuclease III	-
HG567_RS06985 (HG567_06960)	-	1469279..1469914 (-)	636	WP_052936600.1	outer membrane protein	-
HG567_RS06990 (HG567_06965)	-	1469918..1470265 (-)	348	WP_000837038.1	hypothetical protein	-
HG567_RS06995 (HG567_06970)	recG	1470342..1472213 (+)	1872	WP_202139618.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54856.70 Da
• Isoelectric Point: 6.5956

>NTDB_id=439191 HG567_RS06970 WP_202139617.1 1466911..1468350(+) (comH) [Helicobacter pylori strain PUNO-003]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTKIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
ITPSKTNPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNDTSNADIDENNESNENRDNVEKQAVRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439191 HG567_RS06970 WP_202139617.1 1466911..1468350(+) (comH) [Helicobacter pylori strain PUNO-003]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATTAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATTTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACTTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCAAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
ATAACTCCTAGCAAAACAAACCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACGACACCTCTAACGCTGATATTG
ATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCCGTTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAGCAGCCACGAG
CTAAAAGCACGCCTTTAAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.407	100	0.954