Detailed information NTG0439169

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG568_RS07235
• Genome accession: NZ_CP051499
• Coordinates: 1528614..1530044 (-)
• Length: 476 a.a.
• NCBI ID: WP_202167538.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-004
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1523614..1535044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG568_RS07210 (HG568_07200)	recG	1524750..1526621 (-)	1872	WP_202167536.1	ATP-dependent DNA helicase RecG	-
HG568_RS07215 (HG568_07205)	-	1526703..1527047 (+)	345	WP_202141678.1	hypothetical protein	-
HG568_RS07220 (HG568_07210)	-	1527051..1527686 (+)	636	WP_000649617.1	outer membrane protein	-
HG568_RS07225 (HG568_07215)	-	1527683..1528435 (-)	753	WP_202167537.1	exodeoxyribonuclease III	-
HG568_RS07235 (HG568_07225)	comH	1528614..1530044 (-)	1431	WP_202167538.1	competence protein	Machinery gene
HG568_RS07240 (HG568_07230)	dnaA	1530273..1531640 (-)	1368	WP_202167539.1	chromosomal replication initiator protein DnaA	-
HG568_RS07245 (HG568_07235)	-	1531793..1532329 (+)	537	WP_202167540.1	purine-nucleoside phosphorylase	-
HG568_RS07250 (HG568_07240)	-	1532376..1532615 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG568_RS07255 (HG568_07245)	glmS	1532616..1534409 (+)	1794	WP_202167541.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 476 a.a.
• Molecular weight: 54612.66 Da
• Isoelectric Point: 7.4070

>NTDB_id=439169 HG568_RS07235 WP_202167538.1 1528614..1530044(-) (comH) [Helicobacter pylori strain PUNO-004]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSLQNFPYPESKLGSKNPKNSLLQPL
ATPNKTSLANEVKTPTNDTKPPLKHFSEDQENNLFVTPPTEKTLPNNTPNADINESNENKDNAQKQAVRDPNVREFACGK
WVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNTENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSST
EKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNELNLN
EKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1431 bp

>NTDB_id=439169 HG568_RS07235 WP_202167538.1 1528614..1530044(-) (comH) [Helicobacter pylori strain PUNO-004]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCTAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAATGCACCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAATCTCTTCAAAACTTTCCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAACAAGCCTCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTTTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCTACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAAAGCAATGAGAATAAGGATAATGCGCAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCGTGCGGGAAG
TGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGCGAC
AGACATTACCCCTTGCGACTACAGCAACACTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTGTCC
ATAAAACAGAACCTTTAGAAGAACCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCTACA
GAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTTAAAACAAGC
GTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGTCCCAAACAAGACGATCAAACAGAGC
CGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTGAATTTGAAT
GAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAAAGA
ATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAAGCA
CGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.649	100	0.922