Detailed information NTG0439149

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG569_RS07455
• Genome accession: NZ_CP051498
• Coordinates: 1566163..1567602 (-)
• Length: 479 a.a.
• NCBI ID: WP_202272627.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-006
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1561163..1572602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG569_RS07430 (HG569_07430)	recG	1562299..1564170 (-)	1872	WP_202272623.1	ATP-dependent DNA helicase RecG	-
HG569_RS07435 (HG569_07435)	-	1564252..1564596 (+)	345	WP_202141678.1	hypothetical protein	-
HG569_RS07440 (HG569_07440)	-	1564600..1565235 (+)	636	WP_000649617.1	outer membrane protein	-
HG569_RS07445 (HG569_07445)	-	1565232..1565984 (-)	753	WP_202272625.1	exodeoxyribonuclease III	-
HG569_RS07455 (HG569_07455)	comH	1566163..1567602 (-)	1440	WP_202272627.1	competence protein	Machinery gene
HG569_RS07460 (HG569_07460)	dnaA	1567837..1569204 (-)	1368	WP_202272629.1	chromosomal replication initiator protein DnaA	-
HG569_RS07465 (HG569_07465)	-	1569356..1569892 (+)	537	WP_202272631.1	purine-nucleoside phosphorylase	-
HG569_RS07470 (HG569_07470)	-	1569939..1570178 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG569_RS07475 (HG569_07475)	glmS	1570179..1571972 (+)	1794	WP_202272632.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54899.85 Da
• Isoelectric Point: 7.1643

>NTDB_id=439149 HG569_RS07455 WP_202272627.1 1566163..1567602(-) (comH) [Helicobacter pylori strain PUNO-006]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELNPHQMPSLNAPIQKPQNKPTSSQQPLQNFSYPESKLGSKNPKNSLLQPL
ATPNKTSLANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINEHNESNENKDNAQKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNTENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439149 HG569_RS07455 WP_202272627.1 1566163..1567602(-) (comH) [Helicobacter pylori strain PUNO-006]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTAAACCCGCACCAAATGCCTTCCTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAACCTCTTCAAAACTTTTCTTATCCAGAATCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAACAAGCCTCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAAGGATAATGCGCAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACACTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAACCTTTAGAAGAACCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGTCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.484	100	0.925