Detailed information NTG0439128

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG570_RS07260
• Genome accession: NZ_CP051497
• Coordinates: 1544212..1545651 (-)
• Length: 479 a.a.
• NCBI ID: WP_202141680.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-007
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1539212..1550651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG570_RS07235 (HG570_07230)	recG	1540354..1542219 (-)	1866	WP_202141677.1	ATP-dependent DNA helicase RecG	-
HG570_RS07240 (HG570_07235)	-	1542301..1542645 (+)	345	WP_202141678.1	hypothetical protein	-
HG570_RS07245 (HG570_07240)	-	1542649..1543284 (+)	636	WP_000649617.1	outer membrane protein	-
HG570_RS07250 (HG570_07245)	-	1543281..1544033 (-)	753	WP_202141679.1	exodeoxyribonuclease III	-
HG570_RS07260 (HG570_07255)	comH	1544212..1545651 (-)	1440	WP_202141680.1	competence protein	Machinery gene
HG570_RS07265 (HG570_07260)	dnaA	1545873..1547240 (-)	1368	WP_202141681.1	chromosomal replication initiator protein DnaA	-
HG570_RS07270 (HG570_07265)	-	1547392..1547928 (+)	537	WP_202141682.1	purine-nucleoside phosphorylase	-
HG570_RS07275 (HG570_07270)	-	1547975..1548214 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HG570_RS07280 (HG570_07275)	glmS	1548215..1550008 (+)	1794	WP_202141683.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54910.83 Da
• Isoelectric Point: 7.2025

>NTDB_id=439128 HG570_RS07260 WP_202141680.1 1544212..1545651(-) (comH) [Helicobacter pylori strain PUNO-007]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYPESKLGSKNPKNSLLQPL
ATSNKISSANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINERNESNENRDNAEKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRIDENKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439128 HG570_RS07260 WP_202141680.1 1544212..1545651(-) (comH) [Helicobacter pylori strain PUNO-007]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACACACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTTGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTTCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAATAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ACGAACGCAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAAAACAAACA
GACTGCAACAGACATTACCCCTTGTGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.276	100	0.923