Detailed information NTG0439108

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG571_RS07475
• Genome accession: NZ_CP051496
• Coordinates: 1567580..1569019 (-)
• Length: 479 a.a.
• NCBI ID: WP_202140693.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-008
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1562580..1574019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG571_RS07450 (HG571_07455)	recG	1563723..1565588 (-)	1866	WP_202140690.1	ATP-dependent DNA helicase RecG	-
HG571_RS07455 (HG571_07460)	-	1565670..1566014 (+)	345	WP_202140691.1	hypothetical protein	-
HG571_RS07460 (HG571_07465)	-	1566018..1566653 (+)	636	WP_000668050.1	outer membrane protein	-
HG571_RS07465 (HG571_07470)	-	1566650..1567402 (-)	753	WP_202140692.1	exodeoxyribonuclease III	-
HG571_RS07475 (HG571_07480)	comH	1567580..1569019 (-)	1440	WP_202140693.1	competence protein	Machinery gene
HG571_RS07480 (HG571_07485)	dnaA	1569254..1570621 (-)	1368	WP_202140694.1	chromosomal replication initiator protein DnaA	-
HG571_RS07485 (HG571_07490)	-	1570773..1571309 (+)	537	WP_202140695.1	purine-nucleoside phosphorylase	-
HG571_RS07490 (HG571_07495)	-	1571356..1571595 (+)	240	WP_202140696.1	DUF2443 family protein	-
HG571_RS07495 (HG571_07500)	glmS	1571596..1573389 (+)	1794	WP_202140697.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55079.13 Da
• Isoelectric Point: 7.6679

>NTDB_id=439108 HG571_RS07475 WP_202140693.1 1567580..1569019(-) (comH) [Helicobacter pylori strain PUNO-008]
MKKTLCLSFFLTFSNPLQALMIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIFYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATPNKTSLANKVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINERNESNENKDNAQKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEESQTFEAKNNFTILQAR
SSTEKCKRARTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439108 HG571_RS07475 WP_202140693.1 1567580..1569019(-) (comH) [Helicobacter pylori strain PUNO-008]
ATGAAAAAAACCCTTTGTCTATCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTATGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTTTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCACCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTATCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAACAAGTCTCGCTAATAAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACGCAATGAAAGCAATGAGAATAAGGATAATGCGCAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGTCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAACACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAACCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.441	100	0.914